FERRE', FABRIZIO
FERRE', FABRIZIO
DIPARTIMENTO DI FARMACIA E BIOTECNOLOGIE
Docenti di ruolo di IIa fascia
Small noncoding RNAs in osteoarthritis: a focus on microRNAs and tRNAderived fragments
2024 Francesco Alabiso, Cristina Cosentino, Irene Bissoli, Fabrizio Ferre, Veronica Panichi, Paolo Dolzani, Rosa Maria Borzì, Romano Regazzi, Flavio Flamigni, Silvia Cetrullo, Stefania D'Adamo
RNA-seq profiling reveals different pathways between remodeled vessels and myocardium in hypertrophic cardiomyopathy
2022 Pisano, Annalinda; Pera, Loredana Le; Carletti, Raffaella; Cerbelli, Bruna; Pignataro, Maria G; Pernazza, Angelina; Ferre, Fabrizio; Lombardi, Maria; Lazzeroni, Davide; Olivotto, Iacopo; Rimoldi, Ornella E; Foglieni, Chiara; Camici, Paolo G; d'Amati, Giulia
Relative Information Gain: Shannon entropy-based measure of the relative structural conservation in RNA alignments
2021 Pietrosanto, M.; Adinolfi, M.; Guarracino, A.; Ferrè, Fabrizio.; Ausiello, G.; Vitale, I.; Helmer-Citterich, M.
Axitinib exposure triggers endothelial cells senescence through ROS accumulation and ATM activation
2019 Mongiardi M.P.; Radice G.; Piras M.; Stagni V.; Pacioni S.; Re A.; Putti S.; Ferre F.; Farsetti A.; Pallini R.; Barila D.; Levi A.; Falchetti M.L.
Discovering sequence and structure landscapes in RNA interaction motifs
2019 Adinolfi M.; Pietrosanto M.; Parca L.; Ausiello G.; Ferre F.; Helmer-Citterich M.
Modeling cancer drug response through drug-specific informative genes
2019 Parca L.; Pepe G.; Pietrosanto M.; Galvan G.; Galli L.; Palmeri A.; Sciandrone M.; Ferre F.; Ausiello G.; Helmer-Citterich M.
Over-Expression of UV-Damage DNA Repair Genes and Ribonucleic Acid Persistence Contribute to the Resilience of Dried Biofilms of the Desert Cyanobacetrium Chroococcidiopsis Exposed to Mars-Like UV Flux and Long-Term Desiccation
2019 Mosca C.; Rothschild L.J.; Napoli A.; Ferre F.; Pietrosanto M.; Fagliarone C.; Baque M.; Rabbow E.; Rettberg P.; Billi D.
The rs17084733 variant in the KIT 3’ UTR disrupts a miR-221/222 binding site in gastrointestinal stromal tumour: a sponge-like mechanism conferring disease susceptibility
2019 Ravegnini G.; Serrano C.; Simeon V.; Sammarini G.; Nannini M.; Roversi E.; Urbini M.; Ferre F.; Ricci R.; Tarantino G.; Pantaleo M.A.; Hrelia P.; Angelini S.
BEAM web server: A tool for structural RNA motif discovery
2018 Pietrosanto, Marco; Adinolfi, Marta; Casula, Riccardo; Ausiello, Gabriele; Ferrè, Fabrizio; Helmer-Citterich, Manuela
Caspase-8 contributes to angiogenesis and chemotherapy resistance in glioblastoma
2017 Fianco, Giulia; Mongiardi, Maria Patrizia; Levi, Andrea; Luca, Teresa De; Desideri, Marianna; Trisciuoglio, Daniela; Bufalo, Donatella Del; Cinã , Irene; Benedetto, Anna Di; Mottolese, Marcella; Gentile, Antonietta; Centonze, Diego; Ferrè, Fabrizio; Barilà , Daniela
Comparison of two NGS platforms for metagenomic analysis of clinical samples
2017 Tommaso, Biagini; Barbara, Bartolini; Emanuela, Giombini; Fabrizio, Ferrè; Marina, Selleri; Gabriella, Rozera; Capobianchi, Maria R.; Giovanni, Chillemi; Alessandro, Desideri
Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n = 50)
2017 Williams, John L; Iamartino, Daniela; Pruitt, Kim D; Sonstegard, Tad; Smith, Timothy P. L; Low, Wai Yee; Biagini, Tommaso; Bomba, Lorenzo; Capomaccio, Stefano; Castiglioni, Bianca; Coletta, Angelo; Corrado, Federica; Ferré, Fabrizio; Iannuzzi, Leopoldo; Lawley, Cynthia; Macciotta, Nicolò; Mcclure, Matthew; Mancini, Giordano; Matassino, Donato; Mazza, Raffaele; Milanesi, Marco; Moioli, Bianca; Morandi, Nicola; Ramunno, Luigi; Peretti, Vincenzo; Pilla, Fabio; Ramelli, Paola; Schroeder, Steven; Strozzi, Francesco; Thibaud-Nissen, Francoise; Zicarelli, Luigi; Ajmone-Marsan, Paolo; Valentini, Alessio; Chillemi, Giovanni; Zimin, Aleksey
A novel method for the identification of conserved structural patterns in RNA: From small scale to high-throughput applications
2016 Pietrosanto, Marco; Mattei, Eugenio; Helmer Citterich, Manuela; Ferre', Fabrizio
c-MYC inhibition impairs hypoxia response in glioblastoma multiforme
2016 Mongiardi, Maria Patrizia; Savino, Mauro; Falchetti, Maria Laura; Illi, Barbara; Bozzo, Francesca; Valle, Cristiana; Helmer-Citterich, Manuela; Ferrè, Fabrizio; Nasi, Sergio; Levi, Andrea
Genome-wide methylation analysis demonstrates that 5-aza-2-deoxycytidine treatment does not cause random DNA demethylation in fragile X syndrome cells
2016 Tabolacci, Elisabetta; Mancano, Giorgia; Lanni, Stella; Palumbo, Federica; Goracci, Martina; Ferrè, Fabrizio; Helmer-Citterich, Manuela; Neri, Giovanni
Next Generation Sequencing and Linkage Analysis for the Molecular Diagnosis of a Novel Overlapping Syndrome Characterized by Hypertrophic Cardiomyopathy and Typical Electrical Instability of Brugada Syndrome
2016 Mango, Ruggiero; Luchetti, Andrea; Sangiuolo, Raffaele; Ferradini, Valentina; Briglia, Nicola; Giardina, Emiliano; Ferre', Fabrizio; Helmer Citterich, Manuela; Romeo, Francesco; Novelli, Giuseppe; Sangiuolo, Federica
Revealing protein-lncRNA interaction
2016 Ferre', Fabrizio; Colantoni, Alessio; Helmer Citterich, Manuela
RNA-Sequencing for profiling goat milk transcriptome in colostrum and mature milk
2016 Crisà, Alessandra; Ferrè, Fabrizio; Chillemi, Giovanni; Moioli, Bianca
Skeletal muscle transcriptional profiles in two Italian beef breeds, Chianina and Maremmana, reveal breed specific variation
2016 Bongiorni, S; Gruber, C E M; Chillemi, G; Bueno, S; Failla, S; Moioli, B; Ferrè, F; Valentini, A
The human rs1050286 polymorphism alters LOX-1 expression through modifying miR-24 binding
2016 Morini, Elena; Rizzacasa, Barbara; Pucci, Sabina; Polidoro, Chiara; Ferrè, Fabrizio; Caporossi, Daniela; Helmer Citterich, Manuela; Novelli, Giuseppe; Amati, Francesca
| Titolo | Autore(i) | Anno | Periodico | Editore | Tipo | File |
|---|---|---|---|---|---|---|
| Small noncoding RNAs in osteoarthritis: a focus on microRNAs and tRNAderived fragments | Francesco Alabiso, Cristina Cosentino, Irene Bissoli, Fabrizio Ferre, Veronica Panichi, Paolo Dol...zani, Rosa Maria Borzì, Romano Regazzi, Flavio Flamigni, Silvia Cetrullo, Stefania D'Adamo | 2024-01-01 | - | - | 4.03 Poster | - |
| RNA-seq profiling reveals different pathways between remodeled vessels and myocardium in hypertrophic cardiomyopathy | Pisano, Annalinda; Pera, Loredana Le; Carletti, Raffaella; Cerbelli, Bruna; Pignataro, Maria G; P...ernazza, Angelina; Ferre, Fabrizio; Lombardi, Maria; Lazzeroni, Davide; Olivotto, Iacopo; Rimoldi, Ornella E; Foglieni, Chiara; Camici, Paolo G; d'Amati, Giulia | 2022-01-01 | MICROCIRCULATION | - | 1.01 Articolo in rivista | - |
| Relative Information Gain: Shannon entropy-based measure of the relative structural conservation in RNA alignments | Pietrosanto, M.; Adinolfi, M.; Guarracino, A.; Ferrè, Fabrizio.; Ausiello, G.; Vitale, I.; Helmer...-Citterich, M. | 2021-01-01 | NAR GENOMICS AND BIOINFORMATICS | - | 1.01 Articolo in rivista | lqab007.pdf |
| Axitinib exposure triggers endothelial cells senescence through ROS accumulation and ATM activation | Mongiardi M.P.; Radice G.; Piras M.; Stagni V.; Pacioni S.; Re A.; Putti S.; Ferre F.; Farsetti A....; Pallini R.; Barila D.; Levi A.; Falchetti M.L. | 2019-01-01 | ONCOGENE | - | 1.01 Articolo in rivista | - |
| Discovering sequence and structure landscapes in RNA interaction motifs | Adinolfi M.; Pietrosanto M.; Parca L.; Ausiello G.; Ferre F.; Helmer-Citterich M. | 2019-01-01 | NUCLEIC ACIDS RESEARCH | - | 1.01 Articolo in rivista | Adinolfi_NAR2019.pdf |
| Modeling cancer drug response through drug-specific informative genes | Parca L.; Pepe G.; Pietrosanto M.; Galvan G.; Galli L.; Palmeri A.; Sciandrone M.; Ferre F.; Ausi...ello G.; Helmer-Citterich M. | 2019-01-01 | SCIENTIFIC REPORTS | - | 1.01 Articolo in rivista | Parca_ScientificReports2019.pdf |
| Over-Expression of UV-Damage DNA Repair Genes and Ribonucleic Acid Persistence Contribute to the Resilience of Dried Biofilms of the Desert Cyanobacetrium Chroococcidiopsis Exposed to Mars-Like UV Flux and Long-Term Desiccation | Mosca C.; Rothschild L.J.; Napoli A.; Ferre F.; Pietrosanto M.; Fagliarone C.; Baque M.; Rabbow E....; Rettberg P.; Billi D. | 2019-01-01 | FRONTIERS IN MICROBIOLOGY | - | 1.01 Articolo in rivista | Mosca_FrontiersMicrob2019.pdf |
| The rs17084733 variant in the KIT 3’ UTR disrupts a miR-221/222 binding site in gastrointestinal stromal tumour: a sponge-like mechanism conferring disease susceptibility | Ravegnini G.; Serrano C.; Simeon V.; Sammarini G.; Nannini M.; Roversi E.; Urbini M.; Ferre F.; R...icci R.; Tarantino G.; Pantaleo M.A.; Hrelia P.; Angelini S. | 2019-01-01 | EPIGENETICS | - | 1.01 Articolo in rivista | - |
| BEAM web server: A tool for structural RNA motif discovery | Pietrosanto, Marco; Adinolfi, Marta; Casula, Riccardo; Ausiello, Gabriele; Ferrè, Fabrizio; Helme...r-Citterich, Manuela | 2018-01-01 | BIOINFORMATICS | - | 1.01 Articolo in rivista | - |
| Caspase-8 contributes to angiogenesis and chemotherapy resistance in glioblastoma | Fianco, Giulia; Mongiardi, Maria Patrizia; Levi, Andrea; Luca, Teresa De; Desideri, Marianna; Tri...sciuoglio, Daniela; Bufalo, Donatella Del; Cinã , Irene; Benedetto, Anna Di; Mottolese, Marcella; Gentile, Antonietta; Centonze, Diego; Ferrè, Fabrizio; Barilà , Daniela | 2017-01-01 | ELIFE | - | 1.01 Articolo in rivista | Fianco_elife2017.pdf |
| Comparison of two NGS platforms for metagenomic analysis of clinical samples | Tommaso, Biagini; Barbara, Bartolini; Emanuela, Giombini; Fabrizio, Ferrè; Marina, Selleri; Gabri...ella, Rozera; Capobianchi, Maria R.; Giovanni, Chillemi; Alessandro, Desideri | 2017-01-01 | JOURNAL OF BIOCHEMICAL TECHNOLOGY | - | 1.01 Articolo in rivista | - |
| Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n = 50) | Williams, John L; Iamartino, Daniela; Pruitt, Kim D; Sonstegard, Tad; Smith, Timothy P. L; Low, W...ai Yee; Biagini, Tommaso; Bomba, Lorenzo; Capomaccio, Stefano; Castiglioni, Bianca; Coletta, Angelo; Corrado, Federica; Ferré, Fabrizio; Iannuzzi, Leopoldo; Lawley, Cynthia; Macciotta, Nicolò; Mcclure, Matthew; Mancini, Giordano; Matassino, Donato; Mazza, Raffaele; Milanesi, Marco; Moioli, Bianca; Morandi, Nicola; Ramunno, Luigi; Peretti, Vincenzo; Pilla, Fabio; Ramelli, Paola; Schroeder, Steven; Strozzi, Francesco; Thibaud-Nissen, Francoise; Zicarelli, Luigi; Ajmone-Marsan, Paolo; Valentini, Alessio; Chillemi, Giovanni; Zimin, Aleksey | 2017-01-01 | GIGASCIENCE | - | 1.01 Articolo in rivista | Williams_GigaScience2017.pdf |
| A novel method for the identification of conserved structural patterns in RNA: From small scale to high-throughput applications | Pietrosanto, Marco; Mattei, Eugenio; Helmer Citterich, Manuela; Ferre', Fabrizio | 2016-01-01 | NUCLEIC ACIDS RESEARCH | - | 1.01 Articolo in rivista | Pietrosanto_NAR2016.pdf |
| c-MYC inhibition impairs hypoxia response in glioblastoma multiforme | Mongiardi, Maria Patrizia; Savino, Mauro; Falchetti, Maria Laura; Illi, Barbara; Bozzo, Francesca...; Valle, Cristiana; Helmer-Citterich, Manuela; Ferrè, Fabrizio; Nasi, Sergio; Levi, Andrea | 2016-01-01 | ONCOTARGET | - | 1.01 Articolo in rivista | - |
| Genome-wide methylation analysis demonstrates that 5-aza-2-deoxycytidine treatment does not cause random DNA demethylation in fragile X syndrome cells | Tabolacci, Elisabetta; Mancano, Giorgia; Lanni, Stella; Palumbo, Federica; Goracci, Martina; Ferr...è, Fabrizio; Helmer-Citterich, Manuela; Neri, Giovanni | 2016-01-01 | EPIGENETICS & CHROMATIN | - | 1.01 Articolo in rivista | Tabolacci_EpigeneticsChromatin2016.pdf |
| Next Generation Sequencing and Linkage Analysis for the Molecular Diagnosis of a Novel Overlapping Syndrome Characterized by Hypertrophic Cardiomyopathy and Typical Electrical Instability of Brugada Syndrome | Mango, Ruggiero; Luchetti, Andrea; Sangiuolo, Raffaele; Ferradini, Valentina; Briglia, Nicola; Gi...ardina, Emiliano; Ferre', Fabrizio; Helmer Citterich, Manuela; Romeo, Francesco; Novelli, Giuseppe; Sangiuolo, Federica | 2016-01-01 | CIRCULATION JOURNAL | - | 1.01 Articolo in rivista | - |
| Revealing protein-lncRNA interaction | Ferre', Fabrizio; Colantoni, Alessio; Helmer Citterich, Manuela | 2016-01-01 | BRIEFINGS IN BIOINFORMATICS | - | 1.01 Articolo in rivista | Ferre_BriefsBioinfo2016.pdf |
| RNA-Sequencing for profiling goat milk transcriptome in colostrum and mature milk | Crisà, Alessandra; Ferrè, Fabrizio; Chillemi, Giovanni; Moioli, Bianca | 2016-01-01 | BMC VETERINARY RESEARCH | - | 1.01 Articolo in rivista | Crisa_BMCVetRes2016.pdf |
| Skeletal muscle transcriptional profiles in two Italian beef breeds, Chianina and Maremmana, reveal breed specific variation | Bongiorni, S; Gruber, C E M; Chillemi, G; Bueno, S; Failla, S; Moioli, B; Ferrè, F; Valentini, A | 2016-01-01 | MOLECULAR BIOLOGY REPORTS | - | 1.01 Articolo in rivista | - |
| The human rs1050286 polymorphism alters LOX-1 expression through modifying miR-24 binding | Morini, Elena; Rizzacasa, Barbara; Pucci, Sabina; Polidoro, Chiara; Ferrè, Fabrizio; Caporossi, D...aniela; Helmer Citterich, Manuela; Novelli, Giuseppe; Amati, Francesca | 2016-01-01 | JOURNAL OF CELLULAR AND MOLECULAR MEDICINE | - | 1.01 Articolo in rivista | Morini_JCellMolMed2016.pdf |