FERRE', FABRIZIO
FERRE', FABRIZIO
FABIT - DIPARTIMENTO DI FARMACIA E BIOTECNOLOGIE
Docenti di ruolo di IIa fascia
Modeling heart failure by induced pluripotent stem cell-derived organoids
2025 Bissoli, Irene; Alabiso, Francesco; Cosentino, Cristina; Seragnoli Chystyakova, Aleksandra; Ferre, Fabrizio; Alviano, Francesco; Marrazzo, Pasquale; Pignatti, Carla; Agnetti, Giulio; Regazzi, Romano; Flamigni, Flavio; D'Adamo, Stefania; Cetrullo, Silvia
Small noncoding RNAs in osteoarthritis: a focus on microRNAs and tRNAderived fragments
2024 Alabiso, Francesco; Cosentino, Cristina; Bissoli, Irene; Ferre, Fabrizio; Panichi, Veronica; Dolzani, Paolo; Maria Borzì, Rosa; Regazzi, Romano; Flamigni, Flavio; Cetrullo, Silvia; D'Adamo, Stefania
Unveiling small noncoding RNA dynamics and their impact in a model of cardiac organoids
2024 Bissoli, Irene; Alabiso, Francesco; Ferre, Fabrizio; Pignatti, Carla; Agnetti, Giulio; Flamigni, Flavio; Cetrullo, Silvia; D'Adamo, Stefania
RNA-seq profiling reveals different pathways between remodeled vessels and myocardium in hypertrophic cardiomyopathy
2022 Pisano, Annalinda; Pera, Loredana Le; Carletti, Raffaella; Cerbelli, Bruna; Pignataro, Maria G; Pernazza, Angelina; Ferre, Fabrizio; Lombardi, Maria; Lazzeroni, Davide; Olivotto, Iacopo; Rimoldi, Ornella E; Foglieni, Chiara; Camici, Paolo G; D'Amati, Giulia
Relative Information Gain: Shannon entropy-based measure of the relative structural conservation in RNA alignments
2021 Pietrosanto, M.; Adinolfi, M.; Guarracino, A.; Ferrè, Fabrizio.; Ausiello, G.; Vitale, I.; Helmer-Citterich, M.
Axitinib exposure triggers endothelial cells senescence through ROS accumulation and ATM activation
2019 Mongiardi M.P.; Radice G.; Piras M.; Stagni V.; Pacioni S.; Re A.; Putti S.; Ferre F.; Farsetti A.; Pallini R.; Barila D.; Levi A.; Falchetti M.L.
Discovering sequence and structure landscapes in RNA interaction motifs
2019 Adinolfi M.; Pietrosanto M.; Parca L.; Ausiello G.; Ferre F.; Helmer-Citterich M.
Modeling cancer drug response through drug-specific informative genes
2019 Parca L.; Pepe G.; Pietrosanto M.; Galvan G.; Galli L.; Palmeri A.; Sciandrone M.; Ferre F.; Ausiello G.; Helmer-Citterich M.
Over-Expression of UV-Damage DNA Repair Genes and Ribonucleic Acid Persistence Contribute to the Resilience of Dried Biofilms of the Desert Cyanobacetrium Chroococcidiopsis Exposed to Mars-Like UV Flux and Long-Term Desiccation
2019 Mosca C.; Rothschild L.J.; Napoli A.; Ferre F.; Pietrosanto M.; Fagliarone C.; Baque M.; Rabbow E.; Rettberg P.; Billi D.
The rs17084733 variant in the KIT 3’ UTR disrupts a miR-221/222 binding site in gastrointestinal stromal tumour: a sponge-like mechanism conferring disease susceptibility
2019 Ravegnini G.; Serrano C.; Simeon V.; Sammarini G.; Nannini M.; Roversi E.; Urbini M.; Ferre F.; Ricci R.; Tarantino G.; Pantaleo M.A.; Hrelia P.; Angelini S.
BEAM web server: A tool for structural RNA motif discovery
2018 Pietrosanto, Marco; Adinolfi, Marta; Casula, Riccardo; Ausiello, Gabriele; Ferrè, Fabrizio; Helmer-Citterich, Manuela
Caspase-8 contributes to angiogenesis and chemotherapy resistance in glioblastoma
2017 Fianco, Giulia; Mongiardi, Maria Patrizia; Levi, Andrea; Luca, Teresa De; Desideri, Marianna; Trisciuoglio, Daniela; Bufalo, Donatella Del; Cinã , Irene; Benedetto, Anna Di; Mottolese, Marcella; Gentile, Antonietta; Centonze, Diego; Ferrè, Fabrizio; Barilà , Daniela
Comparison of two NGS platforms for metagenomic analysis of clinical samples
2017 Tommaso, Biagini; Barbara, Bartolini; Emanuela, Giombini; Fabrizio, Ferrè; Marina, Selleri; Gabriella, Rozera; Capobianchi, Maria R.; Giovanni, Chillemi; Alessandro, Desideri
Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n = 50)
2017 Williams, John L; Iamartino, Daniela; Pruitt, Kim D; Sonstegard, Tad; Smith, Timothy P. L; Low, Wai Yee; Biagini, Tommaso; Bomba, Lorenzo; Capomaccio, Stefano; Castiglioni, Bianca; Coletta, Angelo; Corrado, Federica; Ferré, Fabrizio; Iannuzzi, Leopoldo; Lawley, Cynthia; Macciotta, Nicolò; Mcclure, Matthew; Mancini, Giordano; Matassino, Donato; Mazza, Raffaele; Milanesi, Marco; Moioli, Bianca; Morandi, Nicola; Ramunno, Luigi; Peretti, Vincenzo; Pilla, Fabio; Ramelli, Paola; Schroeder, Steven; Strozzi, Francesco; Thibaud-Nissen, Francoise; Zicarelli, Luigi; Ajmone-Marsan, Paolo; Valentini, Alessio; Chillemi, Giovanni; Zimin, Aleksey
A novel method for the identification of conserved structural patterns in RNA: From small scale to high-throughput applications
2016 Pietrosanto, Marco; Mattei, Eugenio; Helmer Citterich, Manuela; Ferre', Fabrizio
c-MYC inhibition impairs hypoxia response in glioblastoma multiforme
2016 Mongiardi, Maria Patrizia; Savino, Mauro; Falchetti, Maria Laura; Illi, Barbara; Bozzo, Francesca; Valle, Cristiana; Helmer-Citterich, Manuela; Ferrè, Fabrizio; Nasi, Sergio; Levi, Andrea
Genome-wide methylation analysis demonstrates that 5-aza-2-deoxycytidine treatment does not cause random DNA demethylation in fragile X syndrome cells
2016 Tabolacci, Elisabetta; Mancano, Giorgia; Lanni, Stella; Palumbo, Federica; Goracci, Martina; Ferrè, Fabrizio; Helmer-Citterich, Manuela; Neri, Giovanni
Next Generation Sequencing and Linkage Analysis for the Molecular Diagnosis of a Novel Overlapping Syndrome Characterized by Hypertrophic Cardiomyopathy and Typical Electrical Instability of Brugada Syndrome
2016 Mango, Ruggiero; Luchetti, Andrea; Sangiuolo, Raffaele; Ferradini, Valentina; Briglia, Nicola; Giardina, Emiliano; Ferre', Fabrizio; Helmer Citterich, Manuela; Romeo, Francesco; Novelli, Giuseppe; Sangiuolo, Federica
Revealing protein-lncRNA interaction
2016 Ferre', Fabrizio; Colantoni, Alessio; Helmer Citterich, Manuela
RNA-Sequencing for profiling goat milk transcriptome in colostrum and mature milk
2016 Crisà, Alessandra; Ferrè, Fabrizio; Chillemi, Giovanni; Moioli, Bianca
| Titolo | Autore(i) | Anno | Periodico | Editore | Tipo | File |
|---|---|---|---|---|---|---|
| Modeling heart failure by induced pluripotent stem cell-derived organoids | Bissoli, Irene; Alabiso, Francesco; Cosentino, Cristina; Seragnoli Chystyakova, Aleksandra; Ferre..., Fabrizio; Alviano, Francesco; Marrazzo, Pasquale; Pignatti, Carla; Agnetti, Giulio; Regazzi, Romano; Flamigni, Flavio; D'Adamo, Stefania; Cetrullo, Silvia | 2025-01-01 | BIOCHIMICA ET BIOPHYSICA ACTA. MOLECULAR BASIS OF DISEASE | - | 1.01 Articolo in rivista | 1-s2.0-S0925443925002091-main.pdf |
| Small noncoding RNAs in osteoarthritis: a focus on microRNAs and tRNAderived fragments | Alabiso, Francesco; Cosentino, Cristina; Bissoli, Irene; Ferre, Fabrizio; Panichi, Veronica; Dolz...ani, Paolo; Maria Borzì, Rosa; Regazzi, Romano; Flamigni, Flavio; Cetrullo, Silvia; D'Adamo, Stefania | 2024-01-01 | - | - | 4.03 Poster | - |
| Unveiling small noncoding RNA dynamics and their impact in a model of cardiac organoids | Bissoli, Irene; Alabiso, Francesco; Ferre, Fabrizio; Pignatti, Carla; Agnetti, Giulio; Flamigni, ...Flavio; Cetrullo, Silvia; D'Adamo, Stefania | 2024-01-01 | - | - | 4.01 Contributo in Atti di convegno | - |
| RNA-seq profiling reveals different pathways between remodeled vessels and myocardium in hypertrophic cardiomyopathy | Pisano, Annalinda; Pera, Loredana Le; Carletti, Raffaella; Cerbelli, Bruna; Pignataro, Maria G; P...ernazza, Angelina; Ferre, Fabrizio; Lombardi, Maria; Lazzeroni, Davide; Olivotto, Iacopo; Rimoldi, Ornella E; Foglieni, Chiara; Camici, Paolo G; D'Amati, Giulia | 2022-01-01 | MICROCIRCULATION | - | 1.01 Articolo in rivista | Microcirculation - 2022 - Pisano - RNA‐seq profiling reveals different pathways between remodeled vessels and myocardium in.pdf |
| Relative Information Gain: Shannon entropy-based measure of the relative structural conservation in RNA alignments | Pietrosanto, M.; Adinolfi, M.; Guarracino, A.; Ferrè, Fabrizio.; Ausiello, G.; Vitale, I.; Helmer...-Citterich, M. | 2021-01-01 | NAR GENOMICS AND BIOINFORMATICS | - | 1.01 Articolo in rivista | lqab007.pdf |
| Axitinib exposure triggers endothelial cells senescence through ROS accumulation and ATM activation | Mongiardi M.P.; Radice G.; Piras M.; Stagni V.; Pacioni S.; Re A.; Putti S.; Ferre F.; Farsetti A....; Pallini R.; Barila D.; Levi A.; Falchetti M.L. | 2019-01-01 | ONCOGENE | - | 1.01 Articolo in rivista | - |
| Discovering sequence and structure landscapes in RNA interaction motifs | Adinolfi M.; Pietrosanto M.; Parca L.; Ausiello G.; Ferre F.; Helmer-Citterich M. | 2019-01-01 | NUCLEIC ACIDS RESEARCH | - | 1.01 Articolo in rivista | Adinolfi_NAR2019.pdf |
| Modeling cancer drug response through drug-specific informative genes | Parca L.; Pepe G.; Pietrosanto M.; Galvan G.; Galli L.; Palmeri A.; Sciandrone M.; Ferre F.; Ausi...ello G.; Helmer-Citterich M. | 2019-01-01 | SCIENTIFIC REPORTS | - | 1.01 Articolo in rivista | Parca_ScientificReports2019.pdf |
| Over-Expression of UV-Damage DNA Repair Genes and Ribonucleic Acid Persistence Contribute to the Resilience of Dried Biofilms of the Desert Cyanobacetrium Chroococcidiopsis Exposed to Mars-Like UV Flux and Long-Term Desiccation | Mosca C.; Rothschild L.J.; Napoli A.; Ferre F.; Pietrosanto M.; Fagliarone C.; Baque M.; Rabbow E....; Rettberg P.; Billi D. | 2019-01-01 | FRONTIERS IN MICROBIOLOGY | - | 1.01 Articolo in rivista | Mosca_FrontiersMicrob2019.pdf |
| The rs17084733 variant in the KIT 3’ UTR disrupts a miR-221/222 binding site in gastrointestinal stromal tumour: a sponge-like mechanism conferring disease susceptibility | Ravegnini G.; Serrano C.; Simeon V.; Sammarini G.; Nannini M.; Roversi E.; Urbini M.; Ferre F.; R...icci R.; Tarantino G.; Pantaleo M.A.; Hrelia P.; Angelini S. | 2019-01-01 | EPIGENETICS | - | 1.01 Articolo in rivista | - |
| BEAM web server: A tool for structural RNA motif discovery | Pietrosanto, Marco; Adinolfi, Marta; Casula, Riccardo; Ausiello, Gabriele; Ferrè, Fabrizio; Helme...r-Citterich, Manuela | 2018-01-01 | BIOINFORMATICS | - | 1.01 Articolo in rivista | - |
| Caspase-8 contributes to angiogenesis and chemotherapy resistance in glioblastoma | Fianco, Giulia; Mongiardi, Maria Patrizia; Levi, Andrea; Luca, Teresa De; Desideri, Marianna; Tri...sciuoglio, Daniela; Bufalo, Donatella Del; Cinã , Irene; Benedetto, Anna Di; Mottolese, Marcella; Gentile, Antonietta; Centonze, Diego; Ferrè, Fabrizio; Barilà , Daniela | 2017-01-01 | ELIFE | - | 1.01 Articolo in rivista | Fianco_elife2017.pdf |
| Comparison of two NGS platforms for metagenomic analysis of clinical samples | Tommaso, Biagini; Barbara, Bartolini; Emanuela, Giombini; Fabrizio, Ferrè; Marina, Selleri; Gabri...ella, Rozera; Capobianchi, Maria R.; Giovanni, Chillemi; Alessandro, Desideri | 2017-01-01 | JOURNAL OF BIOCHEMICAL TECHNOLOGY | - | 1.01 Articolo in rivista | - |
| Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n = 50) | Williams, John L; Iamartino, Daniela; Pruitt, Kim D; Sonstegard, Tad; Smith, Timothy P. L; Low, W...ai Yee; Biagini, Tommaso; Bomba, Lorenzo; Capomaccio, Stefano; Castiglioni, Bianca; Coletta, Angelo; Corrado, Federica; Ferré, Fabrizio; Iannuzzi, Leopoldo; Lawley, Cynthia; Macciotta, Nicolò; Mcclure, Matthew; Mancini, Giordano; Matassino, Donato; Mazza, Raffaele; Milanesi, Marco; Moioli, Bianca; Morandi, Nicola; Ramunno, Luigi; Peretti, Vincenzo; Pilla, Fabio; Ramelli, Paola; Schroeder, Steven; Strozzi, Francesco; Thibaud-Nissen, Francoise; Zicarelli, Luigi; Ajmone-Marsan, Paolo; Valentini, Alessio; Chillemi, Giovanni; Zimin, Aleksey | 2017-01-01 | GIGASCIENCE | - | 1.01 Articolo in rivista | Williams_GigaScience2017.pdf |
| A novel method for the identification of conserved structural patterns in RNA: From small scale to high-throughput applications | Pietrosanto, Marco; Mattei, Eugenio; Helmer Citterich, Manuela; Ferre', Fabrizio | 2016-01-01 | NUCLEIC ACIDS RESEARCH | - | 1.01 Articolo in rivista | Pietrosanto_NAR2016.pdf |
| c-MYC inhibition impairs hypoxia response in glioblastoma multiforme | Mongiardi, Maria Patrizia; Savino, Mauro; Falchetti, Maria Laura; Illi, Barbara; Bozzo, Francesca...; Valle, Cristiana; Helmer-Citterich, Manuela; Ferrè, Fabrizio; Nasi, Sergio; Levi, Andrea | 2016-01-01 | ONCOTARGET | - | 1.01 Articolo in rivista | - |
| Genome-wide methylation analysis demonstrates that 5-aza-2-deoxycytidine treatment does not cause random DNA demethylation in fragile X syndrome cells | Tabolacci, Elisabetta; Mancano, Giorgia; Lanni, Stella; Palumbo, Federica; Goracci, Martina; Ferr...è, Fabrizio; Helmer-Citterich, Manuela; Neri, Giovanni | 2016-01-01 | EPIGENETICS & CHROMATIN | - | 1.01 Articolo in rivista | Tabolacci_EpigeneticsChromatin2016.pdf |
| Next Generation Sequencing and Linkage Analysis for the Molecular Diagnosis of a Novel Overlapping Syndrome Characterized by Hypertrophic Cardiomyopathy and Typical Electrical Instability of Brugada Syndrome | Mango, Ruggiero; Luchetti, Andrea; Sangiuolo, Raffaele; Ferradini, Valentina; Briglia, Nicola; Gi...ardina, Emiliano; Ferre', Fabrizio; Helmer Citterich, Manuela; Romeo, Francesco; Novelli, Giuseppe; Sangiuolo, Federica | 2016-01-01 | CIRCULATION JOURNAL | - | 1.01 Articolo in rivista | - |
| Revealing protein-lncRNA interaction | Ferre', Fabrizio; Colantoni, Alessio; Helmer Citterich, Manuela | 2016-01-01 | BRIEFINGS IN BIOINFORMATICS | - | 1.01 Articolo in rivista | Ferre_BriefsBioinfo2016.pdf |
| RNA-Sequencing for profiling goat milk transcriptome in colostrum and mature milk | Crisà, Alessandra; Ferrè, Fabrizio; Chillemi, Giovanni; Moioli, Bianca | 2016-01-01 | BMC VETERINARY RESEARCH | - | 1.01 Articolo in rivista | Crisa_BMCVetRes2016.pdf |