The LIBI project (International Laboratory of BioInformatics), which started in 2005 and will end in 2009, was initiated with the aim of setting up an advanced bioinformatics and computational biology laboratory, focusing on basic and applied research in modern biology and biotechnologies. One of the 2 goals of this project has been the development of a Grid Problem Solving Environment, built on top of EGEE, DEISA and SPACI infrastructures, to allow the submission and monitoring of jobs mapped to complex experiments in bioinformatics. In this work we describe the architecture of this environment and describe several case studies and related results which have been obtained using it.

M. Mirto, I. Epicoco, S. Fiore, M. Cafaro, A. Negro, D. Tartarini, et al. (2009). The LIBI Grid Platform for Bioinformatics. PISCATAWAY : IGI global.

The LIBI Grid Platform for Bioinformatics

BARTOLI, LISA;DI LENA, PIETRO;FARISELLI, PIERO;FRONZA, RAFFAELE;MARGARA, LUCIANO;MONTANUCCI, LUDOVICA;MARTELLI, PIER LUIGI;ROSSI, IVAN;VASSURA, MARCO;CASADIO, RITA;
2009

Abstract

The LIBI project (International Laboratory of BioInformatics), which started in 2005 and will end in 2009, was initiated with the aim of setting up an advanced bioinformatics and computational biology laboratory, focusing on basic and applied research in modern biology and biotechnologies. One of the 2 goals of this project has been the development of a Grid Problem Solving Environment, built on top of EGEE, DEISA and SPACI infrastructures, to allow the submission and monitoring of jobs mapped to complex experiments in bioinformatics. In this work we describe the architecture of this environment and describe several case studies and related results which have been obtained using it.
2009
Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare
557
613
M. Mirto, I. Epicoco, S. Fiore, M. Cafaro, A. Negro, D. Tartarini, et al. (2009). The LIBI Grid Platform for Bioinformatics. PISCATAWAY : IGI global.
M. Mirto; I. Epicoco; S. Fiore; M. Cafaro; A. Negro; D. Tartarini; D. Lezzi; O. Marra; A. Turi; A. Ferramosca; V. Zara; G. Aloisio; G. Donvito; L. Car...espandi
File in questo prodotto:
Eventuali allegati, non sono esposti

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11585/73859
 Attenzione

Attenzione! I dati visualizzati non sono stati sottoposti a validazione da parte dell'ateneo

Citazioni
  • ???jsp.display-item.citation.pmc??? ND
  • Scopus ND
  • ???jsp.display-item.citation.isi??? ND
social impact