CASADIO, RITA
CASADIO, RITA
ARAG - AREA FINANZA E CONTABILITÀ
Collaboratori
Advanced Studies in Biology
In corso di stampa Rita Casadio
Advances in Bioinformatics
In corso di stampa Rita Casadio
Alpha&ESMhFolds: An Updated Web Server for the Comparison, Evaluation, and Annotation of Human AlphaFold2 and ESMFold Models
In corso di stampa Manfredi, M.; Vazzana, G.; Savojardo, C.; Martelli, P. L.; Casadio, R.
Analisi su larga scala dello splicing alternativo nel trascrittoma umano mediante approcci computazionali e sperimentali
In corso di stampa Rita Casadio
BioDataMining
In corso di stampa Rita Casadio
BioMed Research International
In corso di stampa Rita Casadio
BMC BIOINFORMATICS
In corso di stampa Rita Casadio
BMC Research Notes
In corso di stampa Rita Casadio
RGB-Net: a Collaborative European Network on Rabbit Genome Biology
In corso di stampa Rita Casadio
The Open Chemical and Biomedical Methods Journal
In corso di stampa Rita Casadio
Can Human Canonical Glutathione S-Transferases Act as RNA-Binding Proteins?
2026 Vazzana, Gabriele; Martelli, Pier Luigi; Casadio, Rita
Embedding-Based Alignments Capture Structural and Sequence Domains of Distantly Related Multifunctional Human Proteins
2026 Vazzana, G.; Manfredi, M.; Savojardo, C.; Martelli, P. L.; Casadio, R.
AlphaFold2 and ESMFold: A large-scale pairwise model comparison of human enzymes upon Pfam functional annotation
2025 Manfredi, Matteo; Vazzana, Gabriele; Savojardo, Castrense; Martelli, Pier Luigi; Casadio, Rita
Assessing the predicted impact of single amino acid substitutions in calmodulin for CAGI6 challenges
2025 Turina, P.; Dal Cortivo, G.; Enriquez Sandoval, C. A.; Alexov, E.; Ascher, D. B.; Babbi, G.; Bakolitsa, C.; Casadio, R.; Fariselli, P.; Folkman, L.; Kamandula, A.; Katsonis, P.; Li, D.; Lichtarge, O.; Martelli, P. L.; Panday, S. K.; Pires, D. E. V.; Portelli, S.; Pucci, F.; Rodrigues, C. H. M.; Rooman, M.; Savojardo, C.; Schwersensky, M.; Shen, Y.; Strokach, A. V.; Sun, Y.; Woo, J.; Radivojac, P.; Brenner, S. E.; Dell'Orco, D.; Capriotti, E.
Assessing the predicted impact of single amino acid substitutions in MAPK proteins for CAGI6 challenges
2025 Turina, P.; Petrosino, M.; Enriquez Sandoval, C. A.; Novak, L.; Pasquo, A.; Alexov, E.; Alladin, M. A.; Ascher, D. B.; Babbi, G.; Bakolitsa, C.; Casadio, R.; Cheng, J.; Fariselli, P.; Folkman, L.; Kamandula, A.; Katsonis, P.; Li, M.; Li, D.; Lichtarge, O.; Mahmud, S.; Martelli, P. L.; Pal, D.; Panday, S. K.; Pires, D. E. V.; Portelli, S.; Pucci, F.; Rodrigues, C. H. M.; Rooman, M.; Savojardo, C.; Schwersensky, M.; Shen, Y.; Strokach, A. V.; Sun, Y.; Woo, J.; Radivojac, P.; Brenner, S. E.; Chiaraluce, R.; Consalvi, V.; Capriotti, E.
CAGI6 ID panel challenge: assessment of phenotype and variant predictions in 415 children with neurodevelopmental disorders (NDDs)
2025 Aspromonte, M. C.; Del Conte, A.; Zhu, S.; Tan, W.; Shen, Y.; Zhang, Y.; Li, Q.; Wang, M. H.; Babbi, G.; Bovo, S.; Martelli, P. L.; Casadio, R.; Althagafi, A.; Toonsi, S.; Kulmanov, M.; Hoehndorf, R.; Katsonis, P.; Williams, A.; Lichtarge, O.; Xian, S.; Surento, W.; Pejaver, V.; Mooney, S. D.; Sunderam, U.; Srinivasan, R.; Murgia, A.; Piovesan, D.; Tosatto, S. C. E.; Leonardi, E.
Critical assessment of missense variant effect predictors on disease-relevant variant data
2025 Rastogi, Ruchir; Chung, Ryan; Li, Sindy; Li, Chang; Lee, Kyoungyeul; Woo, Junwoo; Kim, Dong-Wook; Keum, Changwon; Babbi, Giulia; Martelli, Pier Luigi; Savojardo, Castrense; Casadio, Rita; Chennen, Kirsley; Weber, Thomas; Poch, Olivier; Ancien, François; Cia, Gabriel; Pucci, Fabrizio; Raimondi, Daniele; Vranken, Wim; Rooman, Marianne; Marquet, Céline; Olenyi, Tobias; Rost, Burkhard; Andreoletti, Gaia; Kamandula, Akash; Peng, Yisu; Bakolitsa, Constantina; Mort, Matthew; Cooper, David N.; Bergquist, Timothy; Pejaver, Vikas; Liu, Xiaoming; Radivojac, Predrag; Brenner, Steven E.; Ioannidis, Nilah M.
DDGemb: predicting protein stability change upon single- and multi-point variations with embeddings and deep learning
2025 Savojardo, Castrense; Manfredi, Matteo; Martelli, Pier Luigi; Casadio, Rita
Evaluating predictors of kinase activity of STK11 variants identified in primary human non-small cell lung cancers
2025 Chen, Yile; Lee, Kyoungyeul; Woo, Junwoo; Kim, Dong-wook; Keum, Changwon; Babbi, Giulia; Casadio, Rita; Martelli, Pier Luigi; Savojardo, Castrense; Manfredi, Matteo; Shen, Yang; Sun, Yuanfei; Katsonis, Panagiotis; Lichtarge, Olivier; Pejaver, Vikas; Seward, David J.; Kamandula, Akash; Bakolitsa, Constantina; Brenner, Steven E.; Radivojac, Predrag; O'Donnell-Luria, Anne; Mooney, Sean D.; Jain, Shantanu
Evaluation of enzyme activity predictions for variants of unknown significance in Arylsulfatase A
2025 Jain, Shantanu; Trinidad, Marena; Nguyen, Thanh Binh; Jones, Kaiya; Neto, Santiago Diaz; Ge, Fang; Glagovsky, Ailin; Jones, Cameron; Moran, Giankaleb; Wang, Boqi; Rahimi, Kobra; Çalıcı, Sümeyra Zeynep; Cedillo, Luis R.; Berardelli, Silvia; Özden, Buse; Chen, Ken; Katsonis, Panagiotis; Williams, Amanda; Lichtarge, Olivier; Rana, Sadhna; Pradhan, Swatantra; Srinivasan, Rajgopal; Sajeed, Rakshanda; Joshi, Dinesh; Faraggi, Eshel; Jernigan, Robert; Kloczkowski, Andrzej; Xu, Jierui; Song, Zigang; Özkan, Selen; Padilla, Natàlia; De La Cruz, Xavier; Acuna-Hidalgo, Rocio; Grafmüller, Andrea; Barrón, Laura T. Jiménez; Manfredi, Matteo; Savojardo, Castrense; Babbi, Giulia; Martelli, Pier Luigi; Casadio, Rita; Sun, Yuanfei; Zhu, Shaowen; Shen, Yang; Pucci, Fabrizio; Rooman, Marianne; Cia, Gabriel; Raimondi, Daniele; Hermans, Pauline; Kwee, Sofia; Chen, Ella; Astore, Courtney; Kamandula, Akash; Pejaver, Vikas; Ramola, Rashika; Velyunskiy, Michelle; Zeiberg, Daniel; Mishra, Reet; Sterling, Teague; Goldstein, Jennifer L.; Lugo-Martinez, Jose; Kazi, Sufyan; Li, Sindy; Long, Kinsey; Brenner, Steven E.; Bakolitsa, Constantina; Radivojac, Predrag; Suhr, Dean; Suhr, Teryn; Clark, Wyatt T.
| Titolo | Autore(i) | Anno | Periodico | Editore | Tipo | File |
|---|---|---|---|---|---|---|
| Advanced Studies in Biology | Rita Casadio | 9999-01-01 | ADVANCED STUDIES IN BIOLOGY | - | 8.01 Ruolo editoriale in rivista | - |
| Advances in Bioinformatics | Rita Casadio | 9999-01-01 | ADVANCES IN BIOINFORMATICS | - | 8.01 Ruolo editoriale in rivista | - |
| Alpha&ESMhFolds: An Updated Web Server for the Comparison, Evaluation, and Annotation of Human AlphaFold2 and ESMFold Models | Manfredi, M.; Vazzana, G.; Savojardo, C.; Martelli, P. L.; Casadio, R. | 9999-01-01 | JOURNAL OF MOLECULAR BIOLOGY | - | 1.01 Articolo in rivista | - |
| Analisi su larga scala dello splicing alternativo nel trascrittoma umano mediante approcci computazionali e sperimentali | Rita Casadio | 9999-01-01 | - | - | 8.04 Coordinamento di progetti di ricerca | - |
| BioDataMining | Rita Casadio | 9999-01-01 | BIODATA MINING | - | 8.01 Ruolo editoriale in rivista | - |
| BioMed Research International | Rita Casadio | 9999-01-01 | BIOMED RESEARCH INTERNATIONAL | - | 8.01 Ruolo editoriale in rivista | - |
| BMC BIOINFORMATICS | Rita Casadio | 9999-01-01 | BMC BIOINFORMATICS | - | 8.01 Ruolo editoriale in rivista | - |
| BMC Research Notes | Rita Casadio | 9999-01-01 | BMC RESEARCH NOTES | - | 8.01 Ruolo editoriale in rivista | - |
| RGB-Net: a Collaborative European Network on Rabbit Genome Biology | Rita Casadio | 9999-01-01 | - | - | 8.04 Coordinamento di progetti di ricerca | - |
| The Open Chemical and Biomedical Methods Journal | Rita Casadio | 9999-01-01 | THE OPEN CHEMICAL AND BIOMEDICAL METHODS JOURNAL | - | 8.01 Ruolo editoriale in rivista | - |
| Can Human Canonical Glutathione S-Transferases Act as RNA-Binding Proteins? | Vazzana, Gabriele; Martelli, Pier Luigi; Casadio, Rita | 2026-01-01 | JOURNAL OF COMPUTATIONAL BIOPHYSICS AND CHEMISTRY | - | 1.01 Articolo in rivista | - |
| Embedding-Based Alignments Capture Structural and Sequence Domains of Distantly Related Multifunctional Human Proteins | Vazzana, G.; Manfredi, M.; Savojardo, C.; Martelli, P. L.; Casadio, R. | 2026-01-01 | COMPUTATION | - | 1.01 Articolo in rivista | computation-14-00025(1).pdf |
| AlphaFold2 and ESMFold: A large-scale pairwise model comparison of human enzymes upon Pfam functional annotation | Manfredi, Matteo; Vazzana, Gabriele; Savojardo, Castrense; Martelli, Pier Luigi; Casadio, Rita | 2025-01-01 | COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL | - | 1.01 Articolo in rivista | 1-s2.0-S200103702500008X-main.pdf |
| Assessing the predicted impact of single amino acid substitutions in calmodulin for CAGI6 challenges | Turina, P.; Dal Cortivo, G.; Enriquez Sandoval, C. A.; Alexov, E.; Ascher, D. B.; Babbi, G.; Bako...litsa, C.; Casadio, R.; Fariselli, P.; Folkman, L.; Kamandula, A.; Katsonis, P.; Li, D.; Lichtarge, O.; Martelli, P. L.; Panday, S. K.; Pires, D. E. V.; Portelli, S.; Pucci, F.; Rodrigues, C. H. M.; Rooman, M.; Savojardo, C.; Schwersensky, M.; Shen, Y.; Strokach, A. V.; Sun, Y.; Woo, J.; Radivojac, P.; Brenner, S. E.; Dell'Orco, D.; Capriotti, E. | 2025-01-01 | HUMAN GENETICS | - | 1.01 Articolo in rivista | - |
| Assessing the predicted impact of single amino acid substitutions in MAPK proteins for CAGI6 challenges | Turina, P.; Petrosino, M.; Enriquez Sandoval, C. A.; Novak, L.; Pasquo, A.; Alexov, E.; Alladin, ...M. A.; Ascher, D. B.; Babbi, G.; Bakolitsa, C.; Casadio, R.; Cheng, J.; Fariselli, P.; Folkman, L.; Kamandula, A.; Katsonis, P.; Li, M.; Li, D.; Lichtarge, O.; Mahmud, S.; Martelli, P. L.; Pal, D.; Panday, S. K.; Pires, D. E. V.; Portelli, S.; Pucci, F.; Rodrigues, C. H. M.; Rooman, M.; Savojardo, C.; Schwersensky, M.; Shen, Y.; Strokach, A. V.; Sun, Y.; Woo, J.; Radivojac, P.; Brenner, S. E.; Chiaraluce, R.; Consalvi, V.; Capriotti, E. | 2025-01-01 | HUMAN GENETICS | - | 1.01 Articolo in rivista | - |
| CAGI6 ID panel challenge: assessment of phenotype and variant predictions in 415 children with neurodevelopmental disorders (NDDs) | Aspromonte, M. C.; Del Conte, A.; Zhu, S.; Tan, W.; Shen, Y.; Zhang, Y.; Li, Q.; Wang, M. H.; Bab...bi, G.; Bovo, S.; Martelli, P. L.; Casadio, R.; Althagafi, A.; Toonsi, S.; Kulmanov, M.; Hoehndorf, R.; Katsonis, P.; Williams, A.; Lichtarge, O.; Xian, S.; Surento, W.; Pejaver, V.; Mooney, S. D.; Sunderam, U.; Srinivasan, R.; Murgia, A.; Piovesan, D.; Tosatto, S. C. E.; Leonardi, E. | 2025-01-01 | HUMAN GENETICS | - | 1.01 Articolo in rivista | s00439-024-02722-w.pdf; 439_2024_2722_MOESM1_ESM.docx |
| Critical assessment of missense variant effect predictors on disease-relevant variant data | Rastogi, Ruchir; Chung, Ryan; Li, Sindy; Li, Chang; Lee, Kyoungyeul; Woo, Junwoo; Kim, Dong-Wook;... Keum, Changwon; Babbi, Giulia; Martelli, Pier Luigi; Savojardo, Castrense; Casadio, Rita; Chennen, Kirsley; Weber, Thomas; Poch, Olivier; Ancien, François; Cia, Gabriel; Pucci, Fabrizio; Raimondi, Daniele; Vranken, Wim; Rooman, Marianne; Marquet, Céline; Olenyi, Tobias; Rost, Burkhard; Andreoletti, Gaia; Kamandula, Akash; Peng, Yisu; Bakolitsa, Constantina; Mort, Matthew; Cooper, David N.; Bergquist, Timothy; Pejaver, Vikas; Liu, Xiaoming; Radivojac, Predrag; Brenner, Steven E.; Ioannidis, Nilah M. | 2025-01-01 | HUMAN GENETICS | - | 1.01 Articolo in rivista | - |
| DDGemb: predicting protein stability change upon single- and multi-point variations with embeddings and deep learning | Savojardo, Castrense; Manfredi, Matteo; Martelli, Pier Luigi; Casadio, Rita | 2025-01-01 | BIOINFORMATICS | - | 1.01 Articolo in rivista | btaf019.pdf |
| Evaluating predictors of kinase activity of STK11 variants identified in primary human non-small cell lung cancers | Chen, Yile; Lee, Kyoungyeul; Woo, Junwoo; Kim, Dong-wook; Keum, Changwon; Babbi, Giulia; Casadio,... Rita; Martelli, Pier Luigi; Savojardo, Castrense; Manfredi, Matteo; Shen, Yang; Sun, Yuanfei; Katsonis, Panagiotis; Lichtarge, Olivier; Pejaver, Vikas; Seward, David J.; Kamandula, Akash; Bakolitsa, Constantina; Brenner, Steven E.; Radivojac, Predrag; O'Donnell-Luria, Anne; Mooney, Sean D.; Jain, Shantanu | 2025-01-01 | HUMAN GENETICS | - | 1.01 Articolo in rivista | s00439-025-02726-0.pdf |
| Evaluation of enzyme activity predictions for variants of unknown significance in Arylsulfatase A | Jain, Shantanu; Trinidad, Marena; Nguyen, Thanh Binh; Jones, Kaiya; Neto, Santiago Diaz; Ge, Fang...; Glagovsky, Ailin; Jones, Cameron; Moran, Giankaleb; Wang, Boqi; Rahimi, Kobra; Çalıcı, Sümeyra Zeynep; Cedillo, Luis R.; Berardelli, Silvia; Özden, Buse; Chen, Ken; Katsonis, Panagiotis; Williams, Amanda; Lichtarge, Olivier; Rana, Sadhna; Pradhan, Swatantra; Srinivasan, Rajgopal; Sajeed, Rakshanda; Joshi, Dinesh; Faraggi, Eshel; Jernigan, Robert; Kloczkowski, Andrzej; Xu, Jierui; Song, Zigang; Özkan, Selen; Padilla, Natàlia; De La Cruz, Xavier; Acuna-Hidalgo, Rocio; Grafmüller, Andrea; Barrón, Laura T. Jiménez; Manfredi, Matteo; Savojardo, Castrense; Babbi, Giulia; Martelli, Pier Luigi; Casadio, Rita; Sun, Yuanfei; Zhu, Shaowen; Shen, Yang; Pucci, Fabrizio; Rooman, Marianne; Cia, Gabriel; Raimondi, Daniele; Hermans, Pauline; Kwee, Sofia; Chen, Ella; Astore, Courtney; Kamandula, Akash; Pejaver, Vikas; Ramola, Rashika; Velyunskiy, Michelle; Zeiberg, Daniel; Mishra, Reet; Sterling, Teague; Goldstein, Jennifer L.; Lugo-Martinez, Jose; Kazi, Sufyan; Li, Sindy; Long, Kinsey; Brenner, Steven E.; Bakolitsa, Constantina; Radivojac, Predrag; Suhr, Dean; Suhr, Teryn; Clark, Wyatt T. | 2025-01-01 | HUMAN GENETICS | - | 1.01 Articolo in rivista | - |