Herein we propose the d-Trp-Phe sequence within an inverse type II b-turn as a new kind of pharmacophoric motif for mopioid receptor (MOR) cyclopeptide agonists. Initially, we observed that c[Tyr-d-Pro-d-Trp-Phe-Gly] (4), an analogue of endomorphin- 1 (H-Tyr-Pro-Trp-Phe-NH2) lacking the crucial protonatable amino group of Tyr1, is a MOR agonist with 108m affinity. Molecular docking analysis suggested that the relevant interactions with the receptor involve d-Trp-Phe. The bioactive conformation of this region was investigated by selected derivatives of 4 designed to adopt an inverse type II b-turn. These efforts led to c[Tyr-Gly-d-Trp-Phe-Gly] (14) and to the cyclotetrapeptide c[d-Asp-1-amide-b-Ala-d-Trp-Phe] (15), showing improved nanomolar affinity. Both 14 and 15 selectively bind MOR, as they have negligible affinity for the k- and d-opioid receptors. Both 14 and 15 behave as partial MOR agonists in functional assays. Conformational and docking analyses confirm the role of the inverse b-turn in binding. These results indicate that the d-Trp-Phe inverse b-turn structure can be used for designing non-endomorphin-like peptidomimetic opioid agonists in general, characterized by an atypical mechanism of interaction between ligand and receptor.
Gentilucci L, Tolomelli A, De Marco R, Spampinato S, Bedini A, Artali R. (2011). The Inverse Type II β-Turn on D-Trp-Phe, a Pharmacophoric Motif for MOR Agonists. CHEMMEDCHEM, 6(9), 1640-1653 [10.1002/cmdc.201100169].
The Inverse Type II β-Turn on D-Trp-Phe, a Pharmacophoric Motif for MOR Agonists.
GENTILUCCI, LUCA;TOLOMELLI, ALESSANDRA;DE MARCO, ROSSELLA;SPAMPINATO, SANTI MARIO;BEDINI, ANDREA;
2011
Abstract
Herein we propose the d-Trp-Phe sequence within an inverse type II b-turn as a new kind of pharmacophoric motif for mopioid receptor (MOR) cyclopeptide agonists. Initially, we observed that c[Tyr-d-Pro-d-Trp-Phe-Gly] (4), an analogue of endomorphin- 1 (H-Tyr-Pro-Trp-Phe-NH2) lacking the crucial protonatable amino group of Tyr1, is a MOR agonist with 108m affinity. Molecular docking analysis suggested that the relevant interactions with the receptor involve d-Trp-Phe. The bioactive conformation of this region was investigated by selected derivatives of 4 designed to adopt an inverse type II b-turn. These efforts led to c[Tyr-Gly-d-Trp-Phe-Gly] (14) and to the cyclotetrapeptide c[d-Asp-1-amide-b-Ala-d-Trp-Phe] (15), showing improved nanomolar affinity. Both 14 and 15 selectively bind MOR, as they have negligible affinity for the k- and d-opioid receptors. Both 14 and 15 behave as partial MOR agonists in functional assays. Conformational and docking analyses confirm the role of the inverse b-turn in binding. These results indicate that the d-Trp-Phe inverse b-turn structure can be used for designing non-endomorphin-like peptidomimetic opioid agonists in general, characterized by an atypical mechanism of interaction between ligand and receptor.I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.