TIBERI, SIMONE
TIBERI, SIMONE
STAT - DIPARTIMENTO DI SCIENZE STATISTICHE "PAOLO FORTUNATI"
Ricercatori a tempo determinato
A Bayesian two-layer latent variable model for protein inference
2025 Bollon, Jordy; Tiberi, Simone
DESpace: spatially variable gene detection via differential expression testing of spatial clusters
2024 Cai, Peiying; D Robinson, Mark; Tiberi, Simone
DifferentialRegulation: a Bayesian hierarchical approach to identify differentially regulated genes.
2024 simone tiberi, Joël Meili, Peiying Cai, Charlotte Soneson, Dongze He, Hirak Sarkar, Alejandra Avalos-Pacheco, Rob Patro, and Mark D Robinson
distinct: a novel approach to differential distribution analyses
2023 Tiberi, Simone; L Crowell, Helena; Samartsidis, Pantelis; M Weber, Lukas; D Robinson, Mark
A guide to trajectory inference and RNA velocity
2022 Philipp Weiler; Koen Van den Berge; Kelly Street; Simone Tiberi
Enhanced protein isoform characterization through long-read proteogenomics
2022 Rachel M. Miller, Ben T. Jordan, Madison M. Mehlferber, Erin D. Jeffery, Christina Chatzipantsiou, Simi Kaur, Robert J. Millikin, Yunxiang Dai, Simone Tiberi, Peter J. Castaldi, Michael R. Shortreed, Chance John Luckey, Ana Conesa, Lloyd M. Smith, Anne Deslattes Mays, Gloria M. Sheynkman
Large−Scale Profiling of Extracellular Vesicles Identified miR−625−5p as a Novel Biomarker of Immunotherapy Response in Advanced Non−Small−Cell Lung Cancer Patients
2022 Pantano F.; Zalfa F.; Iuliani M.; Simonetti S.; Manca P.; Napolitano A.; Tiberi S.; Russano M.; Citarella F.; Foderaro S.; Vulpis E.; Zingoni A.; Masuelli L.; Bei R.; Ribelli G.; Del Re M.; Danesi R.; Vincenzi B.; Perrone G.; Tonini G.; Santini D.
3’-5’ crosstalk contributes to transcriptional bursting
2021 Cavallaro, Massimo; Walsh, Mark D.; Jones, Matt; Teahan, James; Tiberi, Simone; Finkenstädt, Bärbel; Hebenstreit, Daniel
Apomixis and genetic background affect distinct traits in Hieracium pilosella L. grown under competition
2021 Sailer, Christian; Tiberi, Simone; Schmid, Bernhard; Stãcklin, Jãrg; Grossniklaus, Ueli
BANDITS: Bayesian differential splicing accounting for sample-to-sample variability and mapping uncertainty
2020 Tiberi, S.; Robinson, M. D.
RNA Sequencing Data: Hitchhiker's Guide to Expression Analysis
2019 Van den Berge, Koen; Hembach, Katharina M.; Soneson, Charlotte; Tiberi, Simone; Clement, Lieven; Love, Michael I.; Patro, Rob; Robinson, Mark D.
Unbiased approximations of products of expectations
2019 Lee A.; Tiberi S.; Zanella G.
A composite likelihood approach to predict the sex of the baby
2018 Tiberi S.; Scarpa B.; Sartori N.
Bayesian inference on stochastic gene transcription from flow cytometry data
2018 Tiberi S.; Walsh M.; Cavallaro M.; Hebenstreit D.; Finkenstadt B.
Non-Sentinel Lymph Node Metastases in Breast Cancer Patients with a Positive Sentinel Lymph Node: Validation of Five Nomograms and Development of a New Predictive Model
2011 Lombardi, Augusto; Maggi, Stefano; Lo Russo, Marzia; Scopinaro, Francesco; Di Stefano, Domenica; Pittau, Maria Grazia; Tiberi, Simone; Amanti, Claudio
| Titolo | Autore(i) | Anno | Periodico | Editore | Tipo | File |
|---|---|---|---|---|---|---|
| A Bayesian two-layer latent variable model for protein inference | Bollon, Jordy; Tiberi, Simone | 2025-01-01 | - | - | 4.01 Contributo in Atti di convegno | - |
| DESpace: spatially variable gene detection via differential expression testing of spatial clusters | Cai, Peiying; D Robinson, Mark; Tiberi, Simone | 2024-01-01 | BIOINFORMATICS | - | 1.01 Articolo in rivista | DESpace.pdf |
| DifferentialRegulation: a Bayesian hierarchical approach to identify differentially regulated genes. | simone tiberi, Joël Meili, Peiying Cai, Charlotte Soneson, Dongze He, Hirak Sarkar, Alejandra Ava...los-Pacheco, Rob Patro, and Mark D Robinson | 2024-01-01 | BIOSTATISTICS | - | 1.01 Articolo in rivista | Biostats.pdf; kxae017_supplementary_data.pdf |
| distinct: a novel approach to differential distribution analyses | Tiberi, Simone; L Crowell, Helena; Samartsidis, Pantelis; M Weber, Lukas; D Robinson, Mark | 2023-01-01 | THE ANNALS OF APPLIED STATISTICS | - | 1.01 Articolo in rivista | distinct_AOAS.pdf; 11585_906917.pdf |
| A guide to trajectory inference and RNA velocity | Philipp Weiler; Koen Van den Berge; Kelly Street; Simone Tiberi | 2022-01-01 | - | Springer Publishing | 2.01 Capitolo / saggio in libro | - |
| Enhanced protein isoform characterization through long-read proteogenomics | Rachel M. Miller, Ben T. Jordan, Madison M. Mehlferber, Erin D. Jeffery, Christina Chatzipantsiou..., Simi Kaur, Robert J. Millikin, Yunxiang Dai, Simone Tiberi, Peter J. Castaldi, Michael R. Shortreed, Chance John Luckey, Ana Conesa, Lloyd M. Smith, Anne Deslattes Mays, Gloria M. Sheynkman | 2022-01-01 | GENOME BIOLOGY | - | 1.01 Articolo in rivista | s13059-022-02624-y.pdf |
| Large−Scale Profiling of Extracellular Vesicles Identified miR−625−5p as a Novel Biomarker of Immunotherapy Response in Advanced Non−Small−Cell Lung Cancer Patients | Pantano F.; Zalfa F.; Iuliani M.; Simonetti S.; Manca P.; Napolitano A.; Tiberi S.; Russano M.; C...itarella F.; Foderaro S.; Vulpis E.; Zingoni A.; Masuelli L.; Bei R.; Ribelli G.; Del Re M.; Danesi R.; Vincenzi B.; Perrone G.; Tonini G.; Santini D. | 2022-01-01 | CANCERS | - | 1.01 Articolo in rivista | cancers-14-02435-v3.pdf |
| 3’-5’ crosstalk contributes to transcriptional bursting | Cavallaro, Massimo; Walsh, Mark D.; Jones, Matt; Teahan, James; Tiberi, Simone; Finkenstädt, Bärb...el; Hebenstreit, Daniel | 2021-01-01 | GENOME BIOLOGY | - | 1.01 Articolo in rivista | Genome Biology - 2021 - Cavallaro.pdf |
| Apomixis and genetic background affect distinct traits in Hieracium pilosella L. grown under competition | Sailer, Christian; Tiberi, Simone; Schmid, Bernhard; Stãcklin, Jãrg; Grossniklaus, Ueli | 2021-01-01 | BMC BIOLOGY | - | 1.01 Articolo in rivista | BMC Bioligy - 2021 - Sailer.pdf |
| BANDITS: Bayesian differential splicing accounting for sample-to-sample variability and mapping uncertainty | Tiberi, S.; Robinson, M. D. | 2020-01-01 | GENOME BIOLOGY | - | 1.01 Articolo in rivista | Genome Biology - 2020 - BANDITS.pdf |
| RNA Sequencing Data: Hitchhiker's Guide to Expression Analysis | Van den Berge, Koen; Hembach, Katharina M.; Soneson, Charlotte; Tiberi, Simone; Clement, Lieven; ...Love, Michael I.; Patro, Rob; Robinson, Mark D. | 2019-01-01 | ANNUAL REVIEW OF BIOMEDICAL DATA SCIENCE | - | 1.01 Articolo in rivista | - |
| Unbiased approximations of products of expectations | Lee A.; Tiberi S.; Zanella G. | 2019-01-01 | BIOMETRIKA | - | 1.01 Articolo in rivista | - |
| A composite likelihood approach to predict the sex of the baby | Tiberi S.; Scarpa B.; Sartori N. | 2018-01-01 | STATISTICAL METHODS IN MEDICAL RESEARCH | - | 1.01 Articolo in rivista | - |
| Bayesian inference on stochastic gene transcription from flow cytometry data | Tiberi S.; Walsh M.; Cavallaro M.; Hebenstreit D.; Finkenstadt B. | 2018-01-01 | BIOINFORMATICS | - | 1.01 Articolo in rivista | - |
| Non-Sentinel Lymph Node Metastases in Breast Cancer Patients with a Positive Sentinel Lymph Node: Validation of Five Nomograms and Development of a New Predictive Model | Lombardi, Augusto; Maggi, Stefano; Lo Russo, Marzia; Scopinaro, Francesco; Di Stefano, Domenica; ...Pittau, Maria Grazia; Tiberi, Simone; Amanti, Claudio | 2011-01-01 | TUMORI | - | 1.01 Articolo in rivista | - |