FICARRA, ELISA
FICARRA, ELISA
A Molecular Dynamics study of a miRNA:mRNA interaction
2011 PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA; DERIU, MARCO AGOSTINO; MACII, Enrico
A New Latent Semantic Analysis Based Methodology For Knowledge Extraction From Biomedical Literature And Biological Pathways Databases
2011 ABATE, FRANCESCO; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico
A NOVEL ANALYSIS FLOW FOR FUSED TRANSCRIPTS DISCOVERY FROM PAIRED-END RNA-SEQ DATA
2012 ABATE, FRANCESCO; PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA; Ferrarini A.; Delledonne M.; MACII, Enrico
Acceleration of Coarse Grain Molecular Dynamics on GPU Architectures
2013 SHKURTI, ARDITA; Mario Orsi; MACII, Enrico; FICARRA, ELISA; ACQUAVIVA, ANDREA
Achieving the Way for Automated Segmentation of Nuclei in Cancer Tissue Images through Morphology-Based Approach: a Quantitative Evaluation
2010 DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII E.
ALK signaling and target therapy in anaplastic large cell lymphoma
2012 F. Tabbó; A. Barreca; R. Piva; G. Inghirami; R. Bruna; D. Corino; D. Cortese; R. Crescenzo; G. Cuccuru; F. Di Giacomo; A. Fioravanti; M. Ladetto; I. Landra; K. Messana; R. Machiorlatti; B. Martinoglio; E. Medico; M. Mossino; E. Pellegrino; M. Todaro; P. Campisi; L. Chiusa; A. Chiappella; D. Novero; U. Vitolo; ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; R. Freilone; M. Chilosi; A. Zamó; F. Facchetti; S. Lonardi; A. De Chiara; F. Fulciniti; C. Doglioni; M. Ponzoni; L. Agnelli; A. Neri; K. Todoerti; C. Agostinelli; P. P. Piccaluga; S. Pileri; B. Falini; E. Tiacci; P. Van Loo; T. Tousseyn; C. De Wolf Peeters; E. Geissinger; H. K. Muller Hermelink; A. Rosenwald; M. A. Pirisand; M. E. Rodriguez; F. Bertoni; M. Boi; I. Kwee
Automated Segmentation of Cells with IHC Membrane Staining
2011 FICARRA, ELISA; DI CATALDO, SANTA; ACQUAVIVA, ANDREA; MACII, Enrico
Automated segmentation of tissue images for computerized IHC analysis
2010 DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico
Binding free energy calculation via Molecular Dynamics simulations for a miRNA:mRNA interaction
2011 PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA; DERIU, MARCO AGOSTINO; MACII, Enrico
Convergent Mutations and Kinase Fusions Lead to Oncogenic STAT3 Activation in Anaplastic Large Cell Lymphoma
2015 Ramona Crescenzo; Francesco Abate; Elena Lasorsa; Fabrizio Tabbo’; Marcello Gaudiano; Nicoletta Chiesa; Filomena Di Giacomo; Elisa Spaccarotella; Luigi Barbarossa; Elisabetta Ercole; Maria Todaro; Michela Boi; ACQUAVIVA, ANDREA; FICARRA, ELISA; Domenico Novero; Andrea Rinaldi; Thomas Tousseyn; Andreas Rosenwald; Lukas Kenner; Lorenzo Cerroni; Alexander Tzankov; Maurilio Ponzoni; Marco Paulli; Dennis Weisenburger; Wing C. Chan; Javeed Iqbal; Miguel A. Piris; Alberto Zamo’; Carmela Ciardullo; Davide Rossi; Gianluca Gaidano; Stefano Pileri; Enrico Tiacci; Brunangelo Falini; Leonard D. Shultz; Laurence Mevellec; Jorge E. Vialard; Roberto Piva; Francesco Bertoni; Raul Rabadan; Giorgio Inghirami
Gelsius: A Literature-Based Workflow for Determining Quantitative Associations between Genes and Biological Processes
2013 ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; PIVA R.; MACII, Enrico
GPU Acceleration of Simulation Tool for Lipid-Bilayers
2010 SHKURTI, ARDITA; ACQUAVIVA, ANDREA; FICARRA, ELISA; Mario Orsi; Martino Ruggiero; MACII, Enrico
Improving Latent Semantic Analysis of Biomedical Literature Integrating UMLS Metathesaurus and Biomedical Pathways Databases
2013 ABATE, FRANCESCO; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico
Integration of Literature with Heterogeneous Information for Genes Correlation Scoring
2013 ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; MACII, Enrico
isomiR-SEA: An RNA-Seq analysis tool for miRNAs/isomiRs expression level profiling and miRNA-mRNA interaction sites evaluation
2016 URGESE, GIANVITO; PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA
MicroRNA Target Prediction and Exploration through Candidate Binding Sites Generation
2010 REYES HERRERA, PAULA HELENA; ACQUAVIVA, ANDREA; FICARRA, ELISA; MACII, Enrico
miR-SEA: miRNA Seed Extension based Aligner Pipeline for NGS Expression Level Extraction
2014 URGESE, GIANVITO; PACIELLO, GIULIA; Isella C.; Medico E.; MACII, Enrico; FICARRA, ELISA; ACQUAVIVA, ANDREA
miREE: miRNA Recognition Elements Ensemble
2011 REYES HERRERA, PAULA HELENA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico
Motion artifact correction in ASL images: an improved automated procedure
2011 DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico
Multiscale Modelling of Cellular Actin Filaments: From Atomistic Molecular to Coarse Grained Dynamics
2012 DERIU, MARCO AGOSTINO; SHKURTI, ARDITA; PACIELLO, GIULIA; BIDONE, TAMARA CARLA; MORBIDUCCI, UMBERTO; FICARRA, ELISA; AUDENINO, Alberto; ACQUAVIVA, ANDREA
Titolo | Autore(i) | Anno | Periodico | Editore | Tipo | File |
---|---|---|---|---|---|---|
A Molecular Dynamics study of a miRNA:mRNA interaction | PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA; DERIU, MARCO AGOSTINO; MACII, Enrico | 2011-01-01 | JOURNAL OF MOLECULAR MODELING | - | 1.01 Articolo in rivista | - |
A New Latent Semantic Analysis Based Methodology For Knowledge Extraction From Biomedical Literature And Biological Pathways Databases | ABATE, FRANCESCO; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico | 2011-01-01 | - | SciTePress | 4.01 Contributo in Atti di convegno | - |
A NOVEL ANALYSIS FLOW FOR FUSED TRANSCRIPTS DISCOVERY FROM PAIRED-END RNA-SEQ DATA | ABATE, FRANCESCO; PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA; Ferrarini A.; Delledonne M....; MACII, Enrico | 2012-01-01 | - | - | 4.01 Contributo in Atti di convegno | - |
Acceleration of Coarse Grain Molecular Dynamics on GPU Architectures | SHKURTI, ARDITA; Mario Orsi; MACII, Enrico; FICARRA, ELISA; ACQUAVIVA, ANDREA | 2013-01-01 | JOURNAL OF COMPUTATIONAL CHEMISTRY | - | 1.04 Replica / breve intervento (e simili) | - |
Achieving the Way for Automated Segmentation of Nuclei in Cancer Tissue Images through Morphology-Based Approach: a Quantitative Evaluation | DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII E. | 2010-01-01 | COMPUTERIZED MEDICAL IMAGING AND GRAPHICS | - | 1.01 Articolo in rivista | - |
ALK signaling and target therapy in anaplastic large cell lymphoma | F. Tabbó; A. Barreca; R. Piva; G. Inghirami; R. Bruna; D. Corino; D. Cortese; R. Crescenzo; G. Cu...ccuru; F. Di Giacomo; A. Fioravanti; M. Ladetto; I. Landra; K. Messana; R. Machiorlatti; B. Martinoglio; E. Medico; M. Mossino; E. Pellegrino; M. Todaro; P. Campisi; L. Chiusa; A. Chiappella; D. Novero; U. Vitolo; ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; R. Freilone; M. Chilosi; A. Zamó; F. Facchetti; S. Lonardi; A. De Chiara; F. Fulciniti; C. Doglioni; M. Ponzoni; L. Agnelli; A. Neri; K. Todoerti; C. Agostinelli; P. P. Piccaluga; S. Pileri; B. Falini; E. Tiacci; P. Van Loo; T. Tousseyn; C. De Wolf Peeters; E. Geissinger; H. K. Muller Hermelink; A. Rosenwald; M. A. Pirisand; M. E. Rodriguez; F. Bertoni; M. Boi; I. Kwee | 2012-01-01 | FRONTIERS IN ONCOLOGY | - | 1.01 Articolo in rivista | - |
Automated Segmentation of Cells with IHC Membrane Staining | FICARRA, ELISA; DI CATALDO, SANTA; ACQUAVIVA, ANDREA; MACII, Enrico | 2011-01-01 | IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING | - | 1.01 Articolo in rivista | - |
Automated segmentation of tissue images for computerized IHC analysis | DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico | 2010-01-01 | COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE | - | 1.01 Articolo in rivista | - |
Binding free energy calculation via Molecular Dynamics simulations for a miRNA:mRNA interaction | PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA; DERIU, MARCO AGOSTINO; MACII, Enrico | 2011-01-01 | - | SciTePress | 4.01 Contributo in Atti di convegno | - |
Convergent Mutations and Kinase Fusions Lead to Oncogenic STAT3 Activation in Anaplastic Large Cell Lymphoma | Ramona Crescenzo; Francesco Abate; Elena Lasorsa; Fabrizio Tabbo’; Marcello Gaudiano; Nicoletta C...hiesa; Filomena Di Giacomo; Elisa Spaccarotella; Luigi Barbarossa; Elisabetta Ercole; Maria Todaro; Michela Boi; ACQUAVIVA, ANDREA; FICARRA, ELISA; Domenico Novero; Andrea Rinaldi; Thomas Tousseyn; Andreas Rosenwald; Lukas Kenner; Lorenzo Cerroni; Alexander Tzankov; Maurilio Ponzoni; Marco Paulli; Dennis Weisenburger; Wing C. Chan; Javeed Iqbal; Miguel A. Piris; Alberto Zamo’; Carmela Ciardullo; Davide Rossi; Gianluca Gaidano; Stefano Pileri; Enrico Tiacci; Brunangelo Falini; Leonard D. Shultz; Laurence Mevellec; Jorge E. Vialard; Roberto Piva; Francesco Bertoni; Raul Rabadan; Giorgio Inghirami | 2015-01-01 | CANCER CELL | - | 1.01 Articolo in rivista | - |
Gelsius: A Literature-Based Workflow for Determining Quantitative Associations between Genes and Biological Processes | ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; PIVA R.; MACII, Enrico | 2013-01-01 | IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS | - | 1.01 Articolo in rivista | - |
GPU Acceleration of Simulation Tool for Lipid-Bilayers | SHKURTI, ARDITA; ACQUAVIVA, ANDREA; FICARRA, ELISA; Mario Orsi; Martino Ruggiero; MACII, Enrico | 2010-01-01 | - | IEEE CS | 4.01 Contributo in Atti di convegno | - |
Improving Latent Semantic Analysis of Biomedical Literature Integrating UMLS Metathesaurus and Biomedical Pathways Databases | ABATE, FRANCESCO; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico | 2013-01-01 | - | Springer Verlag Germany | 4.01 Contributo in Atti di convegno | - |
Integration of Literature with Heterogeneous Information for Genes Correlation Scoring | ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; MACII, Enrico | 2013-01-01 | ACM JOURNAL ON EMERGING TECHNOLOGIES IN COMPUTING SYSTEMS | - | 1.01 Articolo in rivista | - |
isomiR-SEA: An RNA-Seq analysis tool for miRNAs/isomiRs expression level profiling and miRNA-mRNA interaction sites evaluation | URGESE, GIANVITO; PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA | 2016-01-01 | BMC BIOINFORMATICS | - | 1.04 Replica / breve intervento (e simili) | - |
MicroRNA Target Prediction and Exploration through Candidate Binding Sites Generation | REYES HERRERA, PAULA HELENA; ACQUAVIVA, ANDREA; FICARRA, ELISA; MACII, Enrico | 2010-01-01 | - | IEEE | 4.01 Contributo in Atti di convegno | - |
miR-SEA: miRNA Seed Extension based Aligner Pipeline for NGS Expression Level Extraction | URGESE, GIANVITO; PACIELLO, GIULIA; Isella C.; Medico E.; MACII, Enrico; FICARRA, ELISA; ACQUAVIV...A, ANDREA | 2014-01-01 | - | Copicentro Granada S.L | 4.01 Contributo in Atti di convegno | - |
miREE: miRNA Recognition Elements Ensemble | REYES HERRERA, PAULA HELENA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico | 2011-01-01 | BMC BIOINFORMATICS | - | 1.01 Articolo in rivista | - |
Motion artifact correction in ASL images: an improved automated procedure | DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico | 2011-01-01 | - | IEEE | 4.01 Contributo in Atti di convegno | - |
Multiscale Modelling of Cellular Actin Filaments: From Atomistic Molecular to Coarse Grained Dynamics | DERIU, MARCO AGOSTINO; SHKURTI, ARDITA; PACIELLO, GIULIA; BIDONE, TAMARA CARLA; MORBIDUCCI, UMBER...TO; FICARRA, ELISA; AUDENINO, Alberto; ACQUAVIVA, ANDREA | 2012-01-01 | PROTEINS | - | 1.01 Articolo in rivista | - |