FICARRA, ELISA
FICARRA, ELISA
Acceleration of Coarse Grain Molecular Dynamics on GPU Architectures
2013-01-01 SHKURTI, ARDITA; Mario Orsi; MACII, Enrico; FICARRA, ELISA; ACQUAVIVA, ANDREA
Achieving the Way for Automated Segmentation of Nuclei in Cancer Tissue Images through Morphology-Based Approach: a Quantitative Evaluation
2010-01-01 DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII E.
ALK signaling and target therapy in anaplastic large cell lymphoma
2012-01-01 F. Tabbó; A. Barreca; R. Piva; G. Inghirami; R. Bruna; D. Corino; D. Cortese; R. Crescenzo; G. Cuccuru; F. Di Giacomo; A. Fioravanti; M. Ladetto; I. Landra; K. Messana; R. Machiorlatti; B. Martinoglio; E. Medico; M. Mossino; E. Pellegrino; M. Todaro; P. Campisi; L. Chiusa; A. Chiappella; D. Novero; U. Vitolo; ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; R. Freilone; M. Chilosi; A. Zamó; F. Facchetti; S. Lonardi; A. De Chiara; F. Fulciniti; C. Doglioni; M. Ponzoni; L. Agnelli; A. Neri; K. Todoerti; C. Agostinelli; P. P. Piccaluga; S. Pileri; B. Falini; E. Tiacci; P. Van Loo; T. Tousseyn; C. De Wolf Peeters; E. Geissinger; H. K. Muller Hermelink; A. Rosenwald; M. A. Pirisand; M. E. Rodriguez; F. Bertoni; M. Boi; I. Kwee
Automated Segmentation of Cells with IHC Membrane Staining
2011-01-01 FICARRA, ELISA; DI CATALDO, SANTA; ACQUAVIVA, ANDREA; MACII, Enrico
Automated segmentation of tissue images for computerized IHC analysis
2010-01-01 DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico
Binding free energy calculation via Molecular Dynamics simulations for a miRNA:mRNA interaction
2011-01-01 PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA; DERIU, MARCO AGOSTINO; MACII, Enrico
Convergent Mutations and Kinase Fusions Lead to Oncogenic STAT3 Activation in Anaplastic Large Cell Lymphoma
2015-01-01 Ramona Crescenzo; Francesco Abate; Elena Lasorsa; Fabrizio Tabbo’; Marcello Gaudiano; Nicoletta Chiesa; Filomena Di Giacomo; Elisa Spaccarotella; Luigi Barbarossa; Elisabetta Ercole; Maria Todaro; Michela Boi; ACQUAVIVA, ANDREA; FICARRA, ELISA; Domenico Novero; Andrea Rinaldi; Thomas Tousseyn; Andreas Rosenwald; Lukas Kenner; Lorenzo Cerroni; Alexander Tzankov; Maurilio Ponzoni; Marco Paulli; Dennis Weisenburger; Wing C. Chan; Javeed Iqbal; Miguel A. Piris; Alberto Zamo’; Carmela Ciardullo; Davide Rossi; Gianluca Gaidano; Stefano Pileri; Enrico Tiacci; Brunangelo Falini; Leonard D. Shultz; Laurence Mevellec; Jorge E. Vialard; Roberto Piva; Francesco Bertoni; Raul Rabadan; Giorgio Inghirami
Gelsius: A Literature-Based Workflow for Determining Quantitative Associations between Genes and Biological Processes
2013-01-01 ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; PIVA R.; MACII, Enrico
The Genomic and Transcriptomic Landscape of Systemic Mastocytosis
2016-01-01 Simona Soverini, Caterina De Benedittis, Michela Rondoni, Cristina Papayannidis, Elisa Ficarra, Giulia Paciello, Marco Manfrini, Manuela Mancini, Roberta Zanotti, Luigi Scaffidi, Giorgina Specchia, Francesco Albano, Serena Merante, Chiara Elena, Livio Pagano, Domenica Gangemi, Patrizia Tosi, Luana Bavaro, Maria Chiara Fontana, Viviana Guadagnuolo, Alberto Ferrarini, Elisa Zago, Michele Cavo, Massimo Delledonne, Peter Valent, Giovanni Martinelli
GPU Acceleration of Simulation Tool for Lipid-Bilayers
2010-01-01 SHKURTI, ARDITA; ACQUAVIVA, ANDREA; FICARRA, ELISA; Mario Orsi; Martino Ruggiero; MACII, Enrico
Improving Latent Semantic Analysis of Biomedical Literature Integrating UMLS Metathesaurus and Biomedical Pathways Databases
2013-01-01 ABATE, FRANCESCO; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico
Integration of Literature with Heterogeneous Information for Genes Correlation Scoring
2013-01-01 ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; MACII, Enrico
isomiR-SEA: An RNA-Seq analysis tool for miRNAs/isomiRs expression level profiling and miRNA-mRNA interaction sites evaluation
2016-01-01 URGESE, GIANVITO; PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA
MicroRNA Target Prediction and Exploration through Candidate Binding Sites Generation
2010-01-01 REYES HERRERA, PAULA HELENA; ACQUAVIVA, ANDREA; FICARRA, ELISA; MACII, Enrico
miR-SEA: miRNA Seed Extension based Aligner Pipeline for NGS Expression Level Extraction
2014-01-01 URGESE, GIANVITO; PACIELLO, GIULIA; Isella C.; Medico E.; MACII, Enrico; FICARRA, ELISA; ACQUAVIVA, ANDREA
miREE: miRNA Recognition Elements Ensemble
2011-01-01 REYES HERRERA, PAULA HELENA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico
A Molecular Dynamics study of a miRNA:mRNA interaction
2011-01-01 PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA; DERIU, MARCO AGOSTINO; MACII, Enrico
Motion artifact correction in ASL images: an improved automated procedure
2011-01-01 DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico
Multiscale Modelling of Cellular Actin Filaments: From Atomistic Molecular to Coarse Grained Dynamics
2012-01-01 DERIU, MARCO AGOSTINO; SHKURTI, ARDITA; PACIELLO, GIULIA; BIDONE, TAMARA CARLA; MORBIDUCCI, UMBERTO; FICARRA, ELISA; AUDENINO, Alberto; ACQUAVIVA, ANDREA
A New Latent Semantic Analysis Based Methodology For Knowledge Extraction From Biomedical Literature And Biological Pathways Databases
2011-01-01 ABATE, FRANCESCO; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico
| Titolo | Autore(i) | Anno | Periodico | Editore | Tipo | File |
|---|---|---|---|---|---|---|
| Acceleration of Coarse Grain Molecular Dynamics on GPU Architectures | SHKURTI, ARDITA; Mario Orsi; MACII, Enrico; FICARRA, ELISA; ACQUAVIVA, ANDREA | 2013-01-01 | JOURNAL OF COMPUTATIONAL CHEMISTRY | - | 1.04 Replica / breve intervento (e simili) | - |
| Achieving the Way for Automated Segmentation of Nuclei in Cancer Tissue Images through Morphology-Based Approach: a Quantitative Evaluation | DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII E. | 2010-01-01 | COMPUTERIZED MEDICAL IMAGING AND GRAPHICS | - | 1.01 Articolo in rivista | - |
| ALK signaling and target therapy in anaplastic large cell lymphoma | F. Tabbó; A. Barreca; R. Piva; G. Inghirami; R. Bruna; D. Corino; D. Cortese; R. Crescenzo; G. Cuccuru; F. Di Giacomo; A. Fioravanti; M. Ladetto; I. Landra; K. Messana; R. Machiorlatti; B. Martinoglio; E. Medico; M. Mossino; E. Pellegrino; M. Todaro; P. Campisi; L. Chiusa; A. Chiappella; D. Novero; U. Vitolo; ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; R. Freilone; M. Chilosi; A. Zamó; F. Facchetti; S. Lonardi; A. De Chiara; F. Fulciniti; C. Doglioni; M. Ponzoni; L. Agnelli; A. Neri; K. Todoerti; C. Agostinelli; P. P. Piccaluga; S. Pileri; B. Falini; E. Tiacci; P. Van Loo; T. Tousseyn; C. De Wolf Peeters; E. Geissinger; H. K. Muller Hermelink; A. Rosenwald; M. A. Pirisand; M. E. Rodriguez; F. Bertoni; M. Boi; I. Kwee | 2012-01-01 | FRONTIERS IN ONCOLOGY | - | 1.01 Articolo in rivista | - |
| Automated Segmentation of Cells with IHC Membrane Staining | FICARRA, ELISA; DI CATALDO, SANTA; ACQUAVIVA, ANDREA; MACII, Enrico | 2011-01-01 | IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING | - | 1.01 Articolo in rivista | - |
| Automated segmentation of tissue images for computerized IHC analysis | DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico | 2010-01-01 | COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE | - | 1.01 Articolo in rivista | - |
| Binding free energy calculation via Molecular Dynamics simulations for a miRNA:mRNA interaction | PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA; DERIU, MARCO AGOSTINO; MACII, Enrico | 2011-01-01 | - | SciTePress | 4.01 Contributo in Atti di convegno | - |
| Convergent Mutations and Kinase Fusions Lead to Oncogenic STAT3 Activation in Anaplastic Large Cell Lymphoma | Ramona Crescenzo; Francesco Abate; Elena Lasorsa; Fabrizio Tabbo’; Marcello Gaudiano; Nicoletta Chiesa; Filomena Di Giacomo; Elisa Spaccarotella; Luigi Barbarossa; Elisabetta Ercole; Maria Todaro; Michela Boi; ACQUAVIVA, ANDREA; FICARRA, ELISA; Domenico Novero; Andrea Rinaldi; Thomas Tousseyn; Andreas Rosenwald; Lukas Kenner; Lorenzo Cerroni; Alexander Tzankov; Maurilio Ponzoni; Marco Paulli; Dennis Weisenburger; Wing C. Chan; Javeed Iqbal; Miguel A. Piris; Alberto Zamo’; Carmela Ciardullo; Davide Rossi; Gianluca Gaidano; Stefano Pileri; Enrico Tiacci; Brunangelo Falini; Leonard D. Shultz; Laurence Mevellec; Jorge E. Vialard; Roberto Piva; Francesco Bertoni; Raul Rabadan; Giorgio Inghirami | 2015-01-01 | CANCER CELL | - | 1.01 Articolo in rivista | - |
| Gelsius: A Literature-Based Workflow for Determining Quantitative Associations between Genes and Biological Processes | ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; PIVA R.; MACII, Enrico | 2013-01-01 | IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS | - | 1.01 Articolo in rivista | - |
| The Genomic and Transcriptomic Landscape of Systemic Mastocytosis | Simona Soverini, Caterina De Benedittis, Michela Rondoni, Cristina Papayannidis, Elisa Ficarra, Giulia Paciello, Marco Manfrini, Manuela Mancini, Roberta Zanotti, Luigi Scaffidi, Giorgina Specchia, Francesco Albano, Serena Merante, Chiara Elena, Livio Pagano, Domenica Gangemi, Patrizia Tosi, Luana Bavaro, Maria Chiara Fontana, Viviana Guadagnuolo, Alberto Ferrarini, Elisa Zago, Michele Cavo, Massimo Delledonne, Peter Valent, Giovanni Martinelli | 2016-01-01 | BLOOD | - | 1.06 Abstract in rivista | - |
| GPU Acceleration of Simulation Tool for Lipid-Bilayers | SHKURTI, ARDITA; ACQUAVIVA, ANDREA; FICARRA, ELISA; Mario Orsi; Martino Ruggiero; MACII, Enrico | 2010-01-01 | - | IEEE CS | 4.01 Contributo in Atti di convegno | - |
| Improving Latent Semantic Analysis of Biomedical Literature Integrating UMLS Metathesaurus and Biomedical Pathways Databases | ABATE, FRANCESCO; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico | 2013-01-01 | - | Springer Verlag Germany | 4.01 Contributo in Atti di convegno | - |
| Integration of Literature with Heterogeneous Information for Genes Correlation Scoring | ABATE, FRANCESCO; ACQUAVIVA, ANDREA; FICARRA, ELISA; MACII, Enrico | 2013-01-01 | ACM JOURNAL ON EMERGING TECHNOLOGIES IN COMPUTING SYSTEMS | - | 1.01 Articolo in rivista | - |
| isomiR-SEA: An RNA-Seq analysis tool for miRNAs/isomiRs expression level profiling and miRNA-mRNA interaction sites evaluation | URGESE, GIANVITO; PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA | 2016-01-01 | BMC BIOINFORMATICS | - | 1.04 Replica / breve intervento (e simili) | - |
| MicroRNA Target Prediction and Exploration through Candidate Binding Sites Generation | REYES HERRERA, PAULA HELENA; ACQUAVIVA, ANDREA; FICARRA, ELISA; MACII, Enrico | 2010-01-01 | - | IEEE | 4.01 Contributo in Atti di convegno | - |
| miR-SEA: miRNA Seed Extension based Aligner Pipeline for NGS Expression Level Extraction | URGESE, GIANVITO; PACIELLO, GIULIA; Isella C.; Medico E.; MACII, Enrico; FICARRA, ELISA; ACQUAVIVA, ANDREA | 2014-01-01 | - | Copicentro Granada S.L | 4.01 Contributo in Atti di convegno | - |
| miREE: miRNA Recognition Elements Ensemble | REYES HERRERA, PAULA HELENA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico | 2011-01-01 | BMC BIOINFORMATICS | - | 1.01 Articolo in rivista | - |
| A Molecular Dynamics study of a miRNA:mRNA interaction | PACIELLO, GIULIA; ACQUAVIVA, ANDREA; FICARRA, ELISA; DERIU, MARCO AGOSTINO; MACII, Enrico | 2011-01-01 | JOURNAL OF MOLECULAR MODELING | - | 1.01 Articolo in rivista | - |
| Motion artifact correction in ASL images: an improved automated procedure | DI CATALDO, SANTA; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico | 2011-01-01 | - | IEEE | 4.01 Contributo in Atti di convegno | - |
| Multiscale Modelling of Cellular Actin Filaments: From Atomistic Molecular to Coarse Grained Dynamics | DERIU, MARCO AGOSTINO; SHKURTI, ARDITA; PACIELLO, GIULIA; BIDONE, TAMARA CARLA; MORBIDUCCI, UMBERTO; FICARRA, ELISA; AUDENINO, Alberto; ACQUAVIVA, ANDREA | 2012-01-01 | PROTEINS | - | 1.01 Articolo in rivista | - |
| A New Latent Semantic Analysis Based Methodology For Knowledge Extraction From Biomedical Literature And Biological Pathways Databases | ABATE, FRANCESCO; FICARRA, ELISA; ACQUAVIVA, ANDREA; MACII, Enrico | 2011-01-01 | - | SciTePress | 4.01 Contributo in Atti di convegno | - |