Time-dependent density functional theory (TD-DFT) and multiconfigurational second-order perturbation theory (CASPT2) are two of the most widely used methods to investigate photoinduced dynamics in DNA-based systems. These methods sometimes give diverse dynamics in physiological environments usually modeled by quantum mechanics/molecular mechanics (QM/MM) protocol. In this work, we demonstrate for the uridine test case that the underlying topology of the potential energy surfaces of electronic states involved in photoinduced relaxation is similar in both electronic structure methods. This is verified by analyzing surface-hopping dynamics performed at the QM/MM level on aqueous solvated uridine at TD-DFT and CASPT2 levels. By constraining the dynamics to remain on 𝜋𝜋* state we observe similar fluctuations in energy and relaxation lifetimes in surface-hopping dynamics in both TD-DFT and experimentally validated CASPT2 methods. This finding calls for a systematic comparison of the ES potential energy surfaces of DNA and RNA nucleosides at the single- and multi-reference levels of theory. The anomalous long excited state lifetime at the TD-DFT level is explained by 𝑛𝜋* trapping due to the tendency of TD-DFT in QM/MM schemes with electrostatic embedding to underestimate the energy of the 𝜋𝜋* state leading to a wrong 𝜋𝜋*/𝑛𝜋* energetic order. A study of the FC energetics suggests that improving the description of the surrounding environment through polarizable embedding or by the expansion of QM layer with hydrogen-bonded waters helps restore the correct state order at TD-DFT level. Thus by combining TDDFT with an accurate modeling of the environment, TD-DFT is positioned as the standout protocol to model photoinduced dynamics in DNA-based aggregates and multimers.

Reconciling TD‐DFT and CASPT2 electronic structure methods for describing the photophysics of DNA / Jaiswal, Vishal Kumar; Taddei, Mario; Nascimento, Daniel R.; Garavelli, Marco; Conti, Irene; Nenov, Artur. - In: PHOTOCHEMISTRY AND PHOTOBIOLOGY. - ISSN 1751-1097. - ELETTRONICO. - 100:2(2024), pp. 443-452. [10.1111/php.13922]

Reconciling TD‐DFT and CASPT2 electronic structure methods for describing the photophysics of DNA

Jaiswal, Vishal Kumar;Taddei, Mario;Garavelli, Marco;Conti, Irene
Penultimo
;
Nenov, Artur
2024

Abstract

Time-dependent density functional theory (TD-DFT) and multiconfigurational second-order perturbation theory (CASPT2) are two of the most widely used methods to investigate photoinduced dynamics in DNA-based systems. These methods sometimes give diverse dynamics in physiological environments usually modeled by quantum mechanics/molecular mechanics (QM/MM) protocol. In this work, we demonstrate for the uridine test case that the underlying topology of the potential energy surfaces of electronic states involved in photoinduced relaxation is similar in both electronic structure methods. This is verified by analyzing surface-hopping dynamics performed at the QM/MM level on aqueous solvated uridine at TD-DFT and CASPT2 levels. By constraining the dynamics to remain on 𝜋𝜋* state we observe similar fluctuations in energy and relaxation lifetimes in surface-hopping dynamics in both TD-DFT and experimentally validated CASPT2 methods. This finding calls for a systematic comparison of the ES potential energy surfaces of DNA and RNA nucleosides at the single- and multi-reference levels of theory. The anomalous long excited state lifetime at the TD-DFT level is explained by 𝑛𝜋* trapping due to the tendency of TD-DFT in QM/MM schemes with electrostatic embedding to underestimate the energy of the 𝜋𝜋* state leading to a wrong 𝜋𝜋*/𝑛𝜋* energetic order. A study of the FC energetics suggests that improving the description of the surrounding environment through polarizable embedding or by the expansion of QM layer with hydrogen-bonded waters helps restore the correct state order at TD-DFT level. Thus by combining TDDFT with an accurate modeling of the environment, TD-DFT is positioned as the standout protocol to model photoinduced dynamics in DNA-based aggregates and multimers.
2024
Reconciling TD‐DFT and CASPT2 electronic structure methods for describing the photophysics of DNA / Jaiswal, Vishal Kumar; Taddei, Mario; Nascimento, Daniel R.; Garavelli, Marco; Conti, Irene; Nenov, Artur. - In: PHOTOCHEMISTRY AND PHOTOBIOLOGY. - ISSN 1751-1097. - ELETTRONICO. - 100:2(2024), pp. 443-452. [10.1111/php.13922]
Jaiswal, Vishal Kumar; Taddei, Mario; Nascimento, Daniel R.; Garavelli, Marco; Conti, Irene; Nenov, Artur
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11585/968847
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