Extracting the desired data from a database entry for later analysis is a constant need in the biological sequence analysis community; GeneRecords 1.0 is a solution for GenBank biological flat file parsing, as it implements a structured representation of each feature and feature qualifier in GenBank following import in a common database managing system usable in a personal computer (Macintosh and Windows environments). This collection of related databases enables the local management of GenBank records, allowing indexing, retrieval and analysis of both information and sequences on a personal computer. AVAILABILITY: The current release, including the FileMaker Pro runtime application (built for Windows and Macintosh environments), is freely available at http://apollo11.isto.unibo.it/software/
D'ADDABBO P, LENZI L, FACCHIN F, CASADEI R, CANAIDER S., VITALE L, et al. (2004). GeneRecords: a relational database for GenBank flat file parsing and data manipulation in personal computers. BIOINFORMATICS, 20(16), 2883-2885 [10.1093/bioinformatics/bth321].
GeneRecords: a relational database for GenBank flat file parsing and data manipulation in personal computers.
D'ADDABBO, PIETRO;LENZI, LUCA;FACCHIN, FEDERICA;CASADEI, RAFFAELLA;CANAIDER, SILVIA;VITALE, LORENZA;FRABETTI, FLAVIA;CARINCI, PAOLO;ZANNOTTI, MARIA;STRIPPOLI, PIERLUIGI
2004
Abstract
Extracting the desired data from a database entry for later analysis is a constant need in the biological sequence analysis community; GeneRecords 1.0 is a solution for GenBank biological flat file parsing, as it implements a structured representation of each feature and feature qualifier in GenBank following import in a common database managing system usable in a personal computer (Macintosh and Windows environments). This collection of related databases enables the local management of GenBank records, allowing indexing, retrieval and analysis of both information and sequences on a personal computer. AVAILABILITY: The current release, including the FileMaker Pro runtime application (built for Windows and Macintosh environments), is freely available at http://apollo11.isto.unibo.it/software/I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.
