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PACI, EMANUELE

PACI, EMANUELE  

DIFA - DIPARTIMENTO DI FISICA E ASTRONOMIA "AUGUSTO RIGHI"  

Docenti di ruolo di IIa fascia  

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Risultati 1 - 20 di 113 (tempo di esecuzione: 0.063 secondi).
Titolo Autore(i) Anno Periodico Editore Tipo File
Recalibrating Protection Factors Using Millisecond Hydrogen/Deuterium Exchange Mass Spectrometry Stofella, Michele; Seetaloo, Neeleema; St John, Alexander N.; Paci, Emanuele; Phillips, Jonathan ... espandiJ.; Sobott, Frank 2025-01-01 ANALYTICAL CHEMISTRY - 1.01 Articolo in rivista -
CHARMM at 45: Enhancements in Accessibility, Functionality, and Speed Hwang, Wonmuk; Austin, Steven L.; Blondel, Arnaud; Boittier, Eric D.; Boresch, Stefan; Buck, Matt... espandihias; Buckner, Joshua; Caflisch, Amedeo; Chang, Hao-Ting; Cheng, Xi; Choi, Yeol Kyo; Chu, Jhih-Wei; Crowley, Michael F.; Cui, Qiang; Damjanovic, Ana; Deng, Yuqing; Devereux, Mike; Ding, Xinqiang; Feig, Michael F.; Gao, Jiali; Glowacki, David R.; Gonzales, James E.; Hamaneh, Mehdi Bagerhi; Harder, Edward D.; Hayes, Ryan L.; Huang, Jing; Huang, Yandong; Hudson, Phillip S.; Im, Wonpil; Islam, Shahidul M.; Jiang, Wei; Jones, Michael R.; Käser, Silvan; Kearns, Fiona L.; Kern, Nathan R.; Klauda, Jeffery B.; Lazaridis, Themis; Lee, Jinhyuk; Lemkul, Justin A.; Liu, Xiaorong; Luo, Yun; Mackerell, Alexander D.; Major, Dan T.; Meuwly, Markus; Nam, Kwangho; Nilsson, Lennart; Ovchinnikov, Victor; Paci, Emanuele; Park, Soohyung; Pastor, Richard W.; Pittman, Amanda R.; Post, Carol Beth; Prasad, Samarjeet; Pu, Jingzhi; Qi, Yifei; Rathinavelan, Thenmalarchelvi; Roe, Daniel R.; Roux, Benoit; Rowley, Christopher N.; Shen, Jana; Simmonett, Andrew C.; Sodt, Alexander J.; Töpfer, Kai; Upadhyay, Meenu; van der Vaart, Arjan; Vazquez-Salazar, Luis Itza; Venable, Richard M.; Warrensford, Luke C.; Woodcock, H. Lee; Wu, Yujin; Brooks, Charles L.; Brooks, Bernard R.; Karplus, Martin 2024-01-01 JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL - 1.01 Articolo in rivista hwang-et-al-2024-charmm-at-45-enhancements-in-accessibility-functionality-and-speed.pdf
Computational Tools for Hydrogen–Deuterium Exchange Mass Spectrometry Data Analysis Stofella, Michele; Grimaldi, Antonio; Smit, Jochem H.; Claesen, Jürgen; Paci, Emanuele; Sobott, F... espandirank 2024-01-01 CHEMICAL REVIEWS - 1.01 Articolo in rivista -
Phage display identifies Affimer proteins that direct calcium carbonate polymorph formation Sandei, Ilaria; Gaule, Thembaninkosi; Batchelor, Matthew; Paci, Emanuele; Kim, Yi-Yeoun; Kulak, A... espandilexander N.; Tomlinson, Darren C.; Meldrum, Fiona C. 2024-01-01 BIOMATERIALS SCIENCE - 1.01 Articolo in rivista sandei24.pdf; d4bm00165f1.pdf
Structural constraints of pyocin S2 import through the ferripyoverdine receptor FpvAI D Goult, Jonathan; L Van, Daniel C; V Taylor, Yasmin; G Inns, Patrick; Kaminska, Renata; Vesely, ... espandiMartin; Kleanthous, Colin; Paci, Emanuele 2024-01-01 PNAS NEXUS - 1.01 Articolo in rivista goult24.pdf; pgae124_supplementary_data.zip
The Mutagenic Plasticity of the Cholera Toxin B-Subunit Surface Residues: Stability and Affinity Au, Cheuk W.; Manfield, Iain; Webb, Michael E.; Paci, Emanuele; Turnbull, W. Bruce; Ross, James F. 2024-01-01 TOXINS - 1.01 Articolo in rivista au24.pdf
Collagen-like Motifs of SasG: A Novel Fold for Protein Mechanical Strength Bruce, A. J. E.; Paci, E.; Brockwell, D. J. 2023-01-01 JOURNAL OF MOLECULAR BIOLOGY - 1.01 Articolo in rivista bruce23.pdf; ScienceDirect_files.zip
Comparative proximity biotinylation implicates the small GTPase RAB18 in sterol mobilization and biosynthesis Kiss, Robert S.; Chicoine, Jarred; Khalil, Youssef; Sladek, Robert; Chen, He; Pisaturo, Alessandr... espandio; Martin, Cyril; Dale, Jessica D.; Brudenell, Tegan A.; Kamath, Archith; Kyei-Boahen, Jeffrey; Hafiane, Anouar; Daliah, Girija; Alecki, Célia; Hopes, Tayah S.; Heier, Martin; Aligianis, Irene A.; Lebrun, Jean-Jacques; Aspden, Julie; Paci, Emanuele; Kerksiek, Anja; Lütjohann, Dieter; Clayton, Peter; Wills, Jimi C.; von Kriegsheim, Alex; Nilsson, Tommy; Sheridan, Eamonn; Handley, Mark T. 2023-01-01 THE JOURNAL OF BIOLOGICAL CHEMISTRY - 1.01 Articolo in rivista kiss23.pdf; 1-s2.0-S0021925823023232-mmc1.pdf; 1-s2.0-S0021925823023232-mmc2.pdf; 1-s2.0-S0021925823023232-mmc3.xlsx; 1-s2.0-S0021925823023232-mmc4.xlsx; 1-s2.0-S0021925823023232-mmc5.xlsx; 1-s2.0-S0021925823023232-mmc6.xlsx; 1-s2.0-S0021925823023232-mmc7.xlsx; 1-s2.0-S0021925823023232-mmc8.xlsx; 1-s2.0-S0021925823023232-mmc9.xlsx
Powerful Avidity with a Limited Valency for Virus-Attachment Blockers on DC-SIGN: Combining Chelation and Statistical Rebinding with Structural Plasticity of the Receptor Porkolab V.; Lepsik M.; Ordanini S.; St John A.; Le Roy A.; Thepaut M.; Paci E.; Ebel C.; Bernard... espandii A.; Fieschi F. 2023-01-01 ACS CENTRAL SCIENCE - 1.01 Articolo in rivista porkolab23.pdf; oc2c01136_si_001.pdf; oc2c01136_si_004.pdf
ADOPT: intrinsic protein disorder prediction through deep bidirectional transformers Redl, Istvan; Fisicaro, Carlo; Dutton, Oliver; Hoffmann, Falk; Henderson, Louie; Owens, Benjamin ... espandiM. J.; Heberling, Matthew; Paci, Emanuele; Tamiola, Kamil 2022-01-01 NAR GENOMICS AND BIOINFORMATICS - 1.01 Articolo in rivista redl22.pdf; lqad041_supplemental_file.pdf
High-Resolution Hydrogen-Deuterium Protection Factors from Sparse Mass Spectrometry Data Validated by Nuclear Magnetic Resonance Measurements Stofella M.; Skinner S.P.; Sobott F.; Houwing-Duistermaat J.; Paci E. 2022-01-01 JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY - 1.01 Articolo in rivista stofella22.pdf
Computational methods to predict the mutational landscape of the spike protein Paci E.; Ross J.F. 2021-01-01 BIOPHYSICAL JOURNAL - 1.01 Articolo in rivista -
Partial Opening of Cytochrome P450cam (CYP101A1) Is Driven by Allostery and Putidaredoxin Binding Skinner S.P.; Follmer A.H.; Ubbink M.; Poulos T.L.; Houwing-Duistermaat J.J.; Paci E. 2021-01-01 BIOCHEMISTRY - 1.01 Articolo in rivista acs.biochem.1c00406.pdf
Periscope Proteins are variable-length regulators of bacterial cell surface interactions Whelan F.; Lafita A.; Gilburt J.; Degut C.; Griffiths S.C.; Jenkins H.T.; St John A.N.; Paci E.; ... espandiMoir J.W.B.; Plevin M.J.; Baumann C.G.; Bateman A.; Potts J.R. 2021-01-01 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA - 1.01 Articolo in rivista pnas.2101349118.pdf; pnas.2101349118.sapp_compressed.pdf
Protein mechanics probed using simple molecular models Batchelor M.; Papachristos K.; Stofella M.; Yew Z.T.; Paci E. 2020-01-01 BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS - 1.01 Articolo in rivista bba-jcs_revised-unmarked.pdf
Activation of PKA via asymmetric allosteric coupling of structurally conserved cyclic nucleotide binding domains Hao Y.; England J.P.; Bellucci L.; Paci E.; Hodges H.C.; Taylor S.S.; Maillard R.A. 2019-01-01 NATURE COMMUNICATIONS - 1.01 Articolo in rivista hao19.pdf
Allostery in Its Many Disguises: From Theory to Applications Wodak, Shoshana J; Paci, Emanuele; Dokholyan, Nikolay V; Berezovsky, Igor N; Horovitz, Amnon; Li,... espandi Jing; Hilser, Vincent J; Bahar, Ivet; Karanicolas, John; Stock, Gerhard; Hamm, Peter; Stote, Roland H; Eberhardt, Jerome; Chebaro, Yassmine; Dejaegere, Annick; Cecchini, Marco; Changeux, Jean-Pierre; Bolhuis, Peter G; Vreede, Jocelyne; Faccioli, Pietro; Orioli, Simone; Ravasio, Riccardo; Yan, Le; Brito, Carolina; Wyart, Matthieu; Gkeka, Paraskevi; Rivalta, Ivan; Palermo, Giulia; McCammon, J Andrew; Panecka-Hofman, Joanna; Wade, Rebecca C; Di Pizio, Antonella; Niv, Masha Y; Nussinov, Ruth; Tsai, Chung-Jung; Jang, Hyunbum; Padhorny, Dzmitry; Kozakov, Dima; McLeish, Tom 2019-01-01 STRUCTURE - 1.01 Articolo in rivista STRUCTURE-Allostery_post-refer.pdf
Computational Modeling of Designed Ankyrin Repeat Protein Complexes with Their Targets Radom F.; Paci E.; Pluckthun A. 2019-01-01 JOURNAL OF MOLECULAR BIOLOGY - 1.01 Articolo in rivista -
Defining the remarkable structural malleability of a bacterial surface protein Rib domain implicated in infection Whelan F.; Lafita A.; Griffiths S.C.; Cooper R.E.M.; Whittingham J.L.; Turkenburg J.P.; Manfield ... espandiI.W.; St John A.N.; Paci E.; Bateman A.; Potts J.R. 2019-01-01 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA - 1.01 Articolo in rivista -
Directed Assembly of Homopentameric Cholera Toxin B-Subunit Proteins into Higher-Order Structures Using Coiled-Coil Appendages Ross J.F.; Wildsmith G.C.; Johnson M.; Hurdiss D.L.; Hollingsworth K.; Thompson R.F.; Mosayebi M.... espandi; Trinh C.H.; Paci E.; Pearson A.R.; Webb M.E.; Turnbull W.B. 2019-01-01 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY - 1.01 Articolo in rivista ross-et-al-2019-directed-assembly-of-homopentameric-cholera-toxin-b-subunit-proteins-into-higher-order-structures-using_compressed.pdf; ja8b11480_si_001.pdf