SAVOJARDO, CASTRENSE

SAVOJARDO, CASTRENSE  

DIPARTIMENTO DI FARMACIA E BIOTECNOLOGIE  

Ricercatori a tempo determinato  

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Risultati 1 - 20 di 81 (tempo di esecuzione: 0.046 secondi).
Titolo Autore(i) Anno Periodico Editore Tipo File
Analysing the relations among genes and polygenic diseases with eDGAR Giulia Babbi, Pier Luigi Martelli, Giuseppe Profiti, Samuele Bovo, Castrense Savojardo, Rita Casadio 2017-01-01 - - 4.03 Poster -
Ancient DNA SNP-panel data suggests stability in bluefin tuna genetic diversity despite centuries of fluctuating catches in the eastern Atlantic and Mediterranean Andrews A.J.; Puncher G.N.; Bernal-Casasola D.; Di Natale A.; Massari F.; Onar V.; Toker N.Y.; Hanke A.; Pavey S.A.; Savojardo C.; Martelli P.L.; Casadio R.; Cilli E.; Morales-Muniz A.; Mantovani B.; Tinti F.; Cariani A. 2021-01-01 SCIENTIFIC REPORTS - 1.01 Articolo in rivista s41598-021-99708-9.pdf41598_2021_99708_MOESM1_ESM.docx41598_2021_99708_MOESM3_ESM.xlsx41598_2021_99708_MOESM2_ESM.txt
Are machine learning based methods suited to address complex biological problems? Lessons from CAGI-5 challenges Savojardo, Castrense; Babbi, Giulia; Bovo, Samuele; Capriotti, Emidio; Martelli, Pier Luigi; Casadio, Rita 2019-01-01 HUMAN MUTATION - 1.01 Articolo in rivista -
Assessing computational predictions of the phenotypic effect of cystathionine-beta-synthase variants Kasak L.; Bakolitsa C.; Hu Z.; Yu C.; Rine J.; Dimster-Denk D.F.; Pandey G.; De Baets G.; Bromberg Y.; Cao C.; Capriotti E.; Casadio R.; Van Durme J.; Giollo M.; Karchin R.; Katsonis P.; Leonardi E.; Lichtarge O.; Martelli P.L.; Masica D.; Mooney S.D.; Olatubosun A.; Radivojac P.; Rousseau F.; Pal L.R.; Savojardo C.; Schymkowitz J.; Thusberg J.; Tosatto S.C.E.; Vihinen M.; Valiaho J.; Repo S.; Moult J.; Brenner S.E.; Friedberg I. 2019-01-01 HUMAN MUTATION - 1.01 Articolo in rivista -
Assessing predictions of the impact of variants on splicing in CAGI5 Mount S.M.; Avsec Z.; Carmel L.; Casadio R.; Celik M.H.; Chen K.; Cheng J.; Cohen N.E.; Fairbrother W.G.; Fenesh T.; Gagneur J.; Gotea V.; Holzer T.; Lin C.-F.; Martelli P.L.; Naito T.; Nguyen T.Y.D.; Savojardo C.; Unger R.; Wang R.; Yang Y.; Zhao H. 2019-01-01 HUMAN MUTATION - 1.01 Articolo in rivista -
Assessing predictions on fitness effects of missense variants in calmodulin Zhang J.; Kinch L.N.; Cong Q.; Katsonis P.; Lichtarge O.; Savojardo C.; Babbi G.; Martelli P.L.; Capriotti E.; Casadio R.; Garg A.; Pal D.; Weile J.; Sun S.; Verby M.; Roth F.P.; Grishin N.V. 2019-01-01 HUMAN MUTATION - 1.01 Articolo in rivista -
Assessing the performance of in silico methods for predicting the pathogenicity of variants in the gene CHEK2, among Hispanic females with breast cancer Voskanian A.; Katsonis P.; Lichtarge O.; Pejaver V.; Radivojac P.; Mooney S.D.; Capriotti E.; Bromberg Y.; Wang Y.; Miller M.; Martelli P.L.; Savojardo C.; Babbi G.; Casadio R.; Cao Y.; Sun Y.; Shen Y.; Garg A.; Pal D.; Yu Y.; Huff C.D.; Tavtigian S.V.; Young E.; Neuhausen S.L.; Ziv E.; Pal L.R.; Andreoletti G.; Brenner S.E.; Kann M.G. 2019-01-01 HUMAN MUTATION - 1.01 Articolo in rivista -
Assessment of blind predictions of the clinical significance of BRCA1 and BRCA2 variants Melissa S. Cline,Giulia Babbi,Sandra Bonache,Yue Cao,Rita Casadio,Xavier de la Cruz,Orland Díez,Sara Gutiérrez‐Enríquez,Panagiotis Katsonis,Carmen Lai,Olivier Lichtarge,Pier L. Martelli,Gilad Mishne,Alejandro Moles‐Fernández,Gemma Montalban,Sean D. Mooney,Robert O'Conner,Lars Ootes,Selen Özkan,Natalia Padilla,Kymberleigh A. Pagel,Vikas Pejaver,Predrag Radivojac,Casandra Riera,Castrense Savojardo,Yang Shen,Yuanfei Sun,Scott Topper,Michael T. Parsons,Amanda B. Spurdle,David E. Goldgar,The ENIGMA Consortium 2019-01-01 HUMAN MUTATION - 1.01 Articolo in rivista -
Assessment of methods for predicting the effects of PTEN and TPMT protein variants Pejaver V.; Babbi G.; Casadio R.; Folkman L.; Katsonis P.; Kundu K.; Lichtarge O.; Martelli P.L.; Miller M.; Moult J.; Pal L.R.; Savojardo C.; Yin Y.; Zhou Y.; Radivojac P.; Bromberg Y. 2019-01-01 HUMAN MUTATION - 1.01 Articolo in rivista -
Assessment of predicted enzymatic activity of α-N-acetylglucosaminidase variants of unknown significance for CAGI 2016 Clark W.T.; Kasak L.; Bakolitsa C.; Hu Z.; Andreoletti G.; Babbi G.; Bromberg Y.; Casadio R.; Dunbrack R.; Folkman L.; Ford C.T.; Jones D.; Katsonis P.; Kundu K.; Lichtarge O.; Martelli P.L.; Mooney S.D.; Nodzak C.; Pal L.R.; Radivojac P.; Savojardo C.; Shi X.; Zhou Y.; Uppal A.; Xu Q.; Yin Y.; Pejaver V.; Wang M.; Wei L.; Moult J.; Yu G.K.; Brenner S.E.; LeBowitz J.H. 2019-01-01 HUMAN MUTATION - 1.01 Articolo in rivista -
BCov is a software package designed for predicting protein beta-sheet topology from amino acid sequence. Castrense Savojardo; Piero Fariselli; Pier Luigi Martelli; Rita Casadio 2013-01-01 - - 7.04 Software -
BCov: a method for predicting  beta-sheet topology using sparse inverse covariance estimation and integer programming C. Savojardo;P. Fariselli;P. L. Martelli;R. Casadio 2013-01-01 BIOINFORMATICS - 1.01 Articolo in rivista -
BENZ WS: The Bologna ENZyme Web Server for four-level EC number annotation Baldazzi D.; Savojardo C.; Martelli P.L.; Casadio R. 2021-01-01 NUCLEIC ACIDS RESEARCH - 1.01 Articolo in rivista -
BetAware-Deep: An Accurate Web Server for Discrimination and Topology Prediction of Prokaryotic Transmembrane β-barrel Proteins Madeo G.; Savojardo C.; Martelli P.L.; Casadio R. 2021-01-01 JOURNAL OF MOLECULAR BIOLOGY - 1.01 Articolo in rivista -
BETAWARE: a machine-learning tool to detect and predict transmembrane beta barrel proteins in Prokaryotes. Bioinformatics 29:504-505 (2013) Castrense Savojardo; Piero Fariselli; Rita Casadio 2013-01-01 - - 7.04 Software -
BETAWARE: a machine-learning tool to detect and predict transmembrane beta-barrel proteins in prokaryotes. Savojardo C;Fariselli P;Casadio R 2013-01-01 BIOINFORMATICS - 1.01 Articolo in rivista -
BUSCA is a web server for predicting subcellular localization of proteins Savojardo, Castrense; Martelli, Pier Luigi; Fariselli, Piero; Profiti, Giuseppe; Casadio, Rita 2018-01-01 - - 7.04 Software -
BUSCA: An integrative web server to predict subcellular localization of proteins Savojardo, Castrense; Martelli, Pier Luigi*; Fariselli, Piero; Profiti, Giuseppe; Casadio, Rita 2018-01-01 NUCLEIC ACIDS RESEARCH - 1.01 Articolo in rivista gky320.pdfgky320_supplemental_table.docx
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens Zhou N.; Jiang Y.; Bergquist T.R.; Lee A.J.; Kacsoh B.Z.; Crocker A.W.; Lewis K.A.; Georghiou G.; Nguyen H.N.; Hamid M.N.; Davis L.; Dogan T.; Atalay V.; Rifaioglu A.S.; Dalklran A.; Cetin Atalay R.; Zhang C.; Hurto R.L.; Freddolino P.L.; Zhang Y.; Bhat P.; Supek F.; Fernandez J.M.; Gemovic B.; Perovic V.R.; Davidovic R.S.; Sumonja N.; Veljkovic N.; Asgari E.; Mofrad M.R.K.; Profiti G.; Savojardo C.; Martelli P.L.; Casadio R.; Boecker F.; Schoof H.; Kahanda I.; Thurlby N.; McHardy A.C.; Renaux A.; Saidi R.; Gough J.; Freitas A.A.; Antczak M.; Fabris F.; Wass M.N.; Hou J.; Cheng J.; Wang Z.; Romero A.E.; Paccanaro A.; Yang H.; Goldberg T.; Zhao C.; Holm L.; Toronen P.; Medlar A.J.; Zosa E.; Borukhov I.; Novikov I.; Wilkins A.; Lichtarge O.; Chi P.-H.; Tseng W.-C.; Linial M.; Rose P.W.; Dessimoz C.; Vidulin V.; Dzeroski S.; Sillitoe I.; Das S.; Lees J.G.; Jones D.T.; Wan C.; Cozzetto D.; Fa R.; Torres M.; Warwick Vesztrocy A.; Rodriguez J.M.; Tress M.L.; Frasca M.; Notaro M.; Grossi G.; Petrini A.; Re M.; Valentini G.; Mesiti M.; Roche D.B.; Reeb J.; Ritchie D.W.; Aridhi S.; Alborzi S.Z.; Devignes M.-D.; Koo D.C.E.; Bonneau R.; Gligorijevic V.; Barot M.; Fang H.; Toppo S.; Lavezzo E.; Falda M.; Berselli M.; Tosatto S.C.E.; Carraro M.; Piovesan D.; Ur Rehman H.; Mao Q.; Zhang S.; Vucetic S.; Black G.S.; Jo D.; Suh E.; Dayton J.B.; Larsen D.J.; Omdahl A.R.; McGuffin L.J.; Brackenridge D.A.; Babbitt P.C.; Yunes J.M.; Fontana P.; Zhang F.; Zhu S.; You R.; Zhang Z.; Dai S.; Yao S.; Tian W.; Cao R.; Chandler C.; Amezola M.; Johnson D.; Chang J.-M.; Liao W.-H.; Liu Y.-W.; Pascarelli S.; Frank Y.; Hoehndorf R.; Kulmanov M.; Boudellioua I.; Politano G.; Di Carlo S.; Benso A.; Hakala K.; Ginter F.; Mehryary F.; Kaewphan S.; Bjorne J.; Moen H.; Tolvanen M.E.E.; Salakoski T.; Kihara D.; Jain A.; Smuc T.; Altenhoff A.; Ben-Hur A.; Rost B.; Brenner S.E.; Orengo C.A.; Jeffery C.J.; Bosco G.; Hogan D.A.; Martin M.J.; O'Donovan C.; Mooney S.D.; Greene C.S.; Radivojac P.; Friedberg I. 2019-01-01 GENOME BIOLOGY - 1.01 Articolo in rivista s13059-019-1835-8.pdf
Comparative genomics of tadpole shrimps (Crustacea, Branchiopoda, Notostraca): Dynamic genome evolution against the backdrop of morphological stasis Luchetti A.; Forni G.; Martelossi J.; Savojardo C.; Martelli P.L.; Casadio R.; Skaist A.M.; Wheelan S.J.; Mantovani B. 2021-01-01 GENOMICS - 1.01 Articolo in rivista 21_Luchettietal_GENO.pdf