BERNETTI, MATTIA
BERNETTI, MATTIA
ARAG - AREA FINANZA E CONTABILITA'
Collaboratori
Combining computational and experimental methods to characterize the RAD51-BRC repeats interaction
2024 Bresciani V., Rinaldi F., Bernetti M., Masetti M.
Elucidating the RAD51-BRC repeats interaction by integrating computational and experimental approaches
2024 Bresciani V., Rinaldi F., Bernetti M., Masetti M.
Dissecting the BRCA2 - RAD51 interaction by integrating computational and experimental biophysics
2023 Rinaldi F., Bernetti M., Bresciani V., Girotto S., Cavalli A.
Elucidating the BRCA2 - RAD51 interaction by integrating computational and experimental biophysics
2023 Rinaldi F., Bernetti M., Bresciani V., Girotto S., Cavalli A.
Integration of computational and experimental biophysics reveals novel insights on the BRCA2 - RAD51 interaction
2023 Rinaldi F., Bernetti M., Bresciani V., Girotto S., Cavalli A.
On the allosteric puzzle and pocket crosstalk through computational means
2023 Aguti R.; Bernetti M.; Bosio S.; Decherchi S.; Cavalli A.
Computational drug discovery under RNA times
2022 Bernetti M.; Aguti R.; Bosio S.; Recanatini M.; Masetti M.; Cavalli A.
Data-Driven Molecular Dynamics: A Multifaceted Challenge
2020 Bernetti, Mattia; Bertazzo, Martina; Masetti, Matteo
Enhanced Molecular Dynamics Simulations of Intrinsically Disordered Proteins
2020 Masetti, Matteo; Bernetti, Mattia; Cavalli, Andrea
An Integrated Markov State Model and Path Metadynamics Approach to Characterize Drug Binding Processes
2019 Bernetti M.; Masetti M.; Recanatini M.; Amaro R.E.; Cavalli A.
Kinetics of Drug Binding and Residence Time
2019 Bernetti M.; Masetti M.; Rocchia W.; Cavalli A.
Predicting Residence Time and Drug Unbinding Pathway through Scaled Molecular Dynamics
2019 Schuetz, Doris A.; Bernetti, Mattia; Bertazzo, Martina; Musil, Djordje; Eggenweiler, Hans-Michael; Recanatini, Maurizio; Masetti, Matteo*; Ecker, Gerhard F.; Cavalli, Andrea
Binding Residence Time through Scaled Molecular Dynamics: A Prospective Application to hDAAO Inhibitors
2018 Bernetti, Mattia; Rosini, Elena; Mollica, Luca; Masetti, Matteo; Pollegioni, Loredano; Recanatini, Maurizio; Cavalli, Andrea
Fully Flexible Docking via Reaction-Coordinate-Independent Molecular Dynamics Simulations
2018 Bertazzo, Martina; Bernetti, Mattia; Recanatini, Maurizio; Masetti, Matteo; Cavalli, Andrea
Development of a multisite model for Ni(II) ion in solution from thermodynamic and kinetic data
2017 Masetti, Matteo; Musiani, Francesco; Bernetti, Mattia; Falchi, Federico; Cavalli, Andrea; Ciurli, Stefano; Recanatini, Maurizio
Protein-ligand (un)binding kinetics as a new paradigm for drug discovery at the crossroad between experiments and modelling
2017 Bernetti, M.; Cavalli, A.; Mollica, L
Structural and Kinetic Characterization of the Intrinsically Disordered Protein SeV NTAIL through Enhanced Sampling Simulations
2017 Bernetti, Mattia; Masetti, Matteo; Pietrucci, Fabio; Blackledge, Martin; Jensen, Malene Ringkjobing; Recanatini, Maurizio; Mollica, Luca; Cavalli, Andrea
| Titolo | Autore(i) | Anno | Periodico | Editore | Tipo | File |
|---|---|---|---|---|---|---|
| Combining computational and experimental methods to characterize the RAD51-BRC repeats interaction | Bresciani V., Rinaldi F., Bernetti M., Masetti M. | 2024-01-01 | - | - | 4.01 Contributo in Atti di convegno | - |
| Elucidating the RAD51-BRC repeats interaction by integrating computational and experimental approaches | Bresciani V., Rinaldi F., Bernetti M., Masetti M. | 2024-01-01 | - | - | 4.03 Poster | - |
| Dissecting the BRCA2 - RAD51 interaction by integrating computational and experimental biophysics | Rinaldi F., Bernetti M., Bresciani V., Girotto S., Cavalli A. | 2023-01-01 | - | - | 4.03 Poster | - |
| Elucidating the BRCA2 - RAD51 interaction by integrating computational and experimental biophysics | Rinaldi F., Bernetti M., Bresciani V., Girotto S., Cavalli A. | 2023-01-01 | - | - | 4.02 Riassunto (Abstract) | - |
| Integration of computational and experimental biophysics reveals novel insights on the BRCA2 - RAD51 interaction | Rinaldi F., Bernetti M., Bresciani V., Girotto S., Cavalli A. | 2023-01-01 | - | - | 4.03 Poster | - |
| On the allosteric puzzle and pocket crosstalk through computational means | Aguti R.; Bernetti M.; Bosio S.; Decherchi S.; Cavalli A. | 2023-01-01 | JOURNAL OF CHEMICAL PHYSICS ONLINE | - | 1.01 Articolo in rivista | - |
| Computational drug discovery under RNA times | Bernetti M.; Aguti R.; Bosio S.; Recanatini M.; Masetti M.; Cavalli A. | 2022-01-01 | QRB DISCOVERY | - | 1.01 Articolo in rivista | 2022_Bernetti.pdf |
| Data-Driven Molecular Dynamics: A Multifaceted Challenge | Bernetti, Mattia; Bertazzo, Martina; Masetti, Matteo | 2020-01-01 | PHARMACEUTICALS | - | 1.01 Articolo in rivista | 2020_bernetti.pdf |
| Enhanced Molecular Dynamics Simulations of Intrinsically Disordered Proteins | Masetti, Matteo; Bernetti, Mattia; Cavalli, Andrea | 2020-01-01 | - | Humana | 2.01 Capitolo / saggio in libro | - |
| An Integrated Markov State Model and Path Metadynamics Approach to Characterize Drug Binding Processes | Bernetti M.; Masetti M.; Recanatini M.; Amaro R.E.; Cavalli A. | 2019-01-01 | JOURNAL OF CHEMICAL THEORY AND COMPUTATION | - | 1.01 Articolo in rivista | - |
| Kinetics of Drug Binding and Residence Time | Bernetti M.; Masetti M.; Rocchia W.; Cavalli A. | 2019-01-01 | ANNUAL REVIEW OF PHYSICAL CHEMISTRY | - | 1.01 Articolo in rivista | - |
| Predicting Residence Time and Drug Unbinding Pathway through Scaled Molecular Dynamics | Schuetz, Doris A.; Bernetti, Mattia; Bertazzo, Martina; Musil, Djordje; Eggenweiler, Hans-Michael...; Recanatini, Maurizio; Masetti, Matteo*; Ecker, Gerhard F.; Cavalli, Andrea | 2019-01-01 | JOURNAL OF CHEMICAL INFORMATION AND MODELING | - | 1.01 Articolo in rivista | - |
| Binding Residence Time through Scaled Molecular Dynamics: A Prospective Application to hDAAO Inhibitors | Bernetti, Mattia; Rosini, Elena; Mollica, Luca; Masetti, Matteo; Pollegioni, Loredano; Recanatini..., Maurizio; Cavalli, Andrea | 2018-01-01 | JOURNAL OF CHEMICAL INFORMATION AND MODELING | - | 1.01 Articolo in rivista | - |
| Fully Flexible Docking via Reaction-Coordinate-Independent Molecular Dynamics Simulations | Bertazzo, Martina; Bernetti, Mattia; Recanatini, Maurizio; Masetti, Matteo; Cavalli, Andrea | 2018-01-01 | JOURNAL OF CHEMICAL INFORMATION AND MODELING | - | 1.01 Articolo in rivista | - |
| Development of a multisite model for Ni(II) ion in solution from thermodynamic and kinetic data | Masetti, Matteo; Musiani, Francesco; Bernetti, Mattia; Falchi, Federico; Cavalli, Andrea; Ciurli,... Stefano; Recanatini, Maurizio | 2017-01-01 | JOURNAL OF COMPUTATIONAL CHEMISTRY | - | 1.01 Articolo in rivista | - |
| Protein-ligand (un)binding kinetics as a new paradigm for drug discovery at the crossroad between experiments and modelling | Bernetti, M.; Cavalli, A.; Mollica, L | 2017-01-01 | MEDCHEMCOMM | - | 1.01 Articolo in rivista | - |
| Structural and Kinetic Characterization of the Intrinsically Disordered Protein SeV NTAIL through Enhanced Sampling Simulations | Bernetti, Mattia; Masetti, Matteo; Pietrucci, Fabio; Blackledge, Martin; Jensen, Malene Ringkjobi...ng; Recanatini, Maurizio; Mollica, Luca; Cavalli, Andrea | 2017-01-01 | JOURNAL OF PHYSICAL CHEMISTRY. B, CONDENSED MATTER, MATERIALS, SURFACES, INTERFACES & BIOPHYSICAL | - | 1.01 Articolo in rivista | - |