Sfoglia per Autore
Activation energies by molecular dynamics with constraints
1991-01-01 Paci E.; Ciccotti G.; Ferrario M.; Kapral R.
Intrinsic compressibility and volume compression in solvated proteins by molecular dynamics simulation at high pressure
1996-01-01 Paci E.; Marchi M.
Forced unfolding of fibronectin type 3 modules: An analysis by biased molecular dynamics simulations
1999-01-01 Paci E.; Karplus M.
Unfolding proteins by external forces and temperature: The importance of topology and energetics
2000-01-01 Paci E.; Karplus M.
Three key residues form a critical contact network in a protein folding transition state
2001-01-01 Vendruscolo M.; Paci E.; Dobson C.M.; Karplus M.
Mechanical unfolding of a titin Ig domain: Structure of unfolding intermediate revealed by combining AFM, molecular dynamics simulations, NMR and protein engineering
2002-01-01 Fowler S.B.; Best R.B.; Toca Herrera J.L.; Rutherford T.J.; Steward A.; Paci E.; Karplus M.; Clarke J.
Small-world view of the amino acids that play a key role in protein folding
2002-01-01 Vendruscolo M.; Dokholyan N.V.; Paci E.; Karplus M.
Self-consistent determination of the transition state for protein folding: Application to a fibronectin type III domain
2003-01-01 Paci E.; Clarke J.; Steward A.; Vendruscolo M.; Karplus M.
Analysis of the distributed computing approach applied to the folding of a small β peptide
2003-01-01 Paci E.; Cavalli A.; Vendruscolo M.; Caflisch A.
Pulling geometry defines the mechanical resistance of a β-sheet protein
2003-01-01 Brockwell D.J.; Paci E.; Zinober R.C.; Beddard G.S.; Olmsted P.D.; Smith D.A.; Perham R.N.; Radford S.E.
Rare Fluctuations of Native Proteins Sampled by Equilibrium Hydrogen Exchange
2003-01-01 Vendruscolo M.; Paci E.; Dobson C.M.; Karplus M.
Structures and relative free energies of partially folded states of proteins
2003-01-01 Vendruscolo M.; Paci E.; Karplus M.; Dobson C.M.
Transition states for protein folding have native topologies despite high structural variability
2004-01-01 Lindorff-Larsen K.; Vendruscolo M.; Paci E.; Dobson C.M.
Transition state contact orders correlate with protein folding rates
2005-01-01 Paci E.; Lindorff-Larsen K.; Dobson C.M.; Karplus M.; Vendruscolo M.
Change of the unbinding mechanism upon a mutation: A molecular dynamics study of an antibody-hapten complex
2005-01-01 Curcio R.; Caflisch A.; Paci E.
Comparison of sequence-based and structure-based energy functions for the reversible folding of a peptide
2005-01-01 Cavalli A.; Vendruscolo M.; Paci E.
Mechanically unfolding the small, topologically simple protein L
2005-01-01 Brockwell D.J.; Beddard G.S.; Paci E.; West D.K.; Olmsted P.D.; Smith D.A.; Radford S.E.
Characterization of the molten globule state of retinol-binding protein using a molecular dynamics simulation approach
2005-01-01 Paci E.; Greene L.H.; Jones R.M.; Smith L.J.
The remarkable mechanical strength of polycystin-1 supports a direct role in mechanotransduction
2005-01-01 Forman J.R.; Qamar S.; Paci E.; Sandford R.N.; Clarke J.
Free energy for protein folding from nonequilibrium simulations using the Jarzynski equality
2006-01-01 West D.K.; Olmsted P.D.; Paci E.
| Titolo | Autore(i) | Anno | Periodico | Editore | Tipo | File |
|---|---|---|---|---|---|---|
| Activation energies by molecular dynamics with constraints | Paci E.; Ciccotti G.; Ferrario M.; Kapral R. | 1991-01-01 | CHEMICAL PHYSICS LETTERS | - | 1.01 Articolo in rivista | - |
| Intrinsic compressibility and volume compression in solvated proteins by molecular dynamics simulation at high pressure | Paci E.; Marchi M. | 1996-01-01 | PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA | - | 1.01 Articolo in rivista | - |
| Forced unfolding of fibronectin type 3 modules: An analysis by biased molecular dynamics simulations | Paci E.; Karplus M. | 1999-01-01 | JOURNAL OF MOLECULAR BIOLOGY | - | 1.01 Articolo in rivista | - |
| Unfolding proteins by external forces and temperature: The importance of topology and energetics | Paci E.; Karplus M. | 2000-01-01 | PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA | - | 1.01 Articolo in rivista | - |
| Three key residues form a critical contact network in a protein folding transition state | Vendruscolo M.; Paci E.; Dobson C.M.; Karplus M. | 2001-01-01 | NATURE | - | 1.01 Articolo in rivista | - |
| Mechanical unfolding of a titin Ig domain: Structure of unfolding intermediate revealed by combining AFM, molecular dynamics simulations, NMR and protein engineering | Fowler S.B.; Best R.B.; Toca Herrera J.L.; Rutherford T.J.; Steward A.; Paci E.; Karplus M.; Clarke J. | 2002-01-01 | JOURNAL OF MOLECULAR BIOLOGY | - | 1.01 Articolo in rivista | - |
| Small-world view of the amino acids that play a key role in protein folding | Vendruscolo M.; Dokholyan N.V.; Paci E.; Karplus M. | 2002-01-01 | PHYSICAL REVIEW E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS | - | 1.01 Articolo in rivista | - |
| Self-consistent determination of the transition state for protein folding: Application to a fibronectin type III domain | Paci E.; Clarke J.; Steward A.; Vendruscolo M.; Karplus M. | 2003-01-01 | PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA | - | 1.01 Articolo in rivista | - |
| Analysis of the distributed computing approach applied to the folding of a small β peptide | Paci E.; Cavalli A.; Vendruscolo M.; Caflisch A. | 2003-01-01 | PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA | - | 1.01 Articolo in rivista | - |
| Pulling geometry defines the mechanical resistance of a β-sheet protein | Brockwell D.J.; Paci E.; Zinober R.C.; Beddard G.S.; Olmsted P.D.; Smith D.A.; Perham R.N.; Radford S.E. | 2003-01-01 | NATURE STRUCTURAL BIOLOGY | - | 1.01 Articolo in rivista | - |
| Rare Fluctuations of Native Proteins Sampled by Equilibrium Hydrogen Exchange | Vendruscolo M.; Paci E.; Dobson C.M.; Karplus M. | 2003-01-01 | JOURNAL OF THE AMERICAN CHEMICAL SOCIETY | - | 1.01 Articolo in rivista | - |
| Structures and relative free energies of partially folded states of proteins | Vendruscolo M.; Paci E.; Karplus M.; Dobson C.M. | 2003-01-01 | PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA | - | 1.01 Articolo in rivista | - |
| Transition states for protein folding have native topologies despite high structural variability | Lindorff-Larsen K.; Vendruscolo M.; Paci E.; Dobson C.M. | 2004-01-01 | NATURE STRUCTURAL & MOLECULAR BIOLOGY | - | 1.01 Articolo in rivista | - |
| Transition state contact orders correlate with protein folding rates | Paci E.; Lindorff-Larsen K.; Dobson C.M.; Karplus M.; Vendruscolo M. | 2005-01-01 | JOURNAL OF MOLECULAR BIOLOGY | - | 1.01 Articolo in rivista | - |
| Change of the unbinding mechanism upon a mutation: A molecular dynamics study of an antibody-hapten complex | Curcio R.; Caflisch A.; Paci E. | 2005-01-01 | PROTEIN SCIENCE | - | 1.01 Articolo in rivista | - |
| Comparison of sequence-based and structure-based energy functions for the reversible folding of a peptide | Cavalli A.; Vendruscolo M.; Paci E. | 2005-01-01 | BIOPHYSICAL JOURNAL | - | 1.01 Articolo in rivista | - |
| Mechanically unfolding the small, topologically simple protein L | Brockwell D.J.; Beddard G.S.; Paci E.; West D.K.; Olmsted P.D.; Smith D.A.; Radford S.E. | 2005-01-01 | BIOPHYSICAL JOURNAL | - | 1.01 Articolo in rivista | - |
| Characterization of the molten globule state of retinol-binding protein using a molecular dynamics simulation approach | Paci E.; Greene L.H.; Jones R.M.; Smith L.J. | 2005-01-01 | THE FEBS JOURNAL | - | 1.01 Articolo in rivista | - |
| The remarkable mechanical strength of polycystin-1 supports a direct role in mechanotransduction | Forman J.R.; Qamar S.; Paci E.; Sandford R.N.; Clarke J. | 2005-01-01 | JOURNAL OF MOLECULAR BIOLOGY | - | 1.01 Articolo in rivista | - |
| Free energy for protein folding from nonequilibrium simulations using the Jarzynski equality | West D.K.; Olmsted P.D.; Paci E. | 2006-01-01 | THE JOURNAL OF CHEMICAL PHYSICS | - | 1.01 Articolo in rivista | - |
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